Difference between revisions of "Installed Application Software and Libraries"
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*[[MUSCLE 2016 | MUSCLE]]/3.8.1551-GCC-8.3.0 | *[[MUSCLE 2016 | MUSCLE]]/3.8.1551-GCC-8.3.0 | ||
*ncbi-vdb/2.11.2-iimpi-2019b | *ncbi-vdb/2.11.2-iimpi-2019b | ||
*ncbi-genome-download/0.3.1-GCCcore-8.3.0 | |||
*[[NextGenMap]]/0.5.2 | *[[NextGenMap]]/0.5.2 | ||
*[[NextGenMap]]/0.5.5-intel-2016b | *[[NextGenMap]]/0.5.5-intel-2016b |
Latest revision as of 10:10, 27 April 2023
Introduction
This page was created to give you an overview of the installed software on the cluster (name/version). The list will be updated at least once per week.
If you find a program in this list, but can't find it on the cluster (for example when looking at the output of the command module avail) it has most likely been hidden. Its also possible that a module isn't listed here for the same reason. You can find every hidden module here: /cm/shared/uniol/modules/.hidden. If you want to access a hidden module, you have to add a "." in front of the version number, e.g.:
[abcd1234@hpcl001 ~]$ module load PCRE/8.39-intel-2016b Lmod has detected the following error: The following module(s) are unknown: "PCRE/8.39-intel-2016b" Please also double check spelling and the version number you typed in. Also try "module spider <name>" to include every software package on all environents.
After loading the desired software module you can check all currently loaded modules with "ml": [abcd1234@hpcl001 ~]$ module load PCRE/.8.39-intel-2016b [abcd1234@hpcl001 ~]$ ml Currently Loaded Modules: 1) hpc-uniol-env 3) icc/2016.3.210 5) binutils/.2.26-GCCcore-5.4.0 7) impi/5.1.3.210 9) imkl/11.3.3.210 11) PCRE/.8.39-intel-2016b 2) slurm/current 4) GCCcore/.5.4.0 6) ifort/2016.3.210 8) iimpi/2016b 10) intel/2016b
Latest installed programs and version updates
To keep you up to date, all newly installed programs and version updates of the last two to three months (ca.) are listed in this section. Since early 2020, every new program is installed in the new environment hpc-env/8.3.
Software | Version | Toolchain | Install Date (D/M/Y) |
---|---|---|---|
ncbi-genome-download | 0.3.1 | GCCcore/8.3.0 | 27/04/2023 |
illumina-utils | 2.12 | intel/2019b | 15/03/2023 |
KrakenUniq | 1.0.3 | GCCcore, intel & gompi | 14/03/2023 |
KaHIP | 3.14 | gimkl & gompi | 06/03/2023 |
Kaiju | 1.9.2 | GCCcore/8.3.0 | 28/02/2023 |
FSL | 6.0.6.2 | SYSTEM | 21/02/2023 |
PyTorch | 1.13.1 | conda | 17/02/2023 |
OpenFOAM | v2112 | gimkl/2019b & foss/2019b | 14/02/2023 |
CONCOCT | 1.1.0 | foss/2019b | 07/2023 |
Julia | 1.8.5 & 1.6.7-LTS | SYSTEM | 03/02/2023 |
CheckM | 1.1.10 | foss/2019b | 03/02/2023 |
MetaBAT | 2.15 | gompi/2019b | 03/02/2023 |
Installed Software
/cm/local/modulefiles
- cluster-tools/7.3
- cmd
- dot
- freeipmi/1.5.2
- gcc/6.1.0
- ipmitool/1.8.17
- module-git
- module-info
- openldap
- shared
- hpc-uniol-env (L)
- slurm/current (L)
- ABySS/2.3.5-foss-2019b
- anvio/7.1-intel-2019b-Python-3.7.4
- AUGUSTUS/3.2.3-intel-2016b-Python-2.7.12
- AUGUSTUS/3.2.3-intel-2018a-Python-2.7.14
- AUGUSTUS/3.3-intel-2018a
- AUGUSTUS/3.3.2-intel-2018a
- AUGUSTUS/3.3.3-foss-2019b
- AUGUSTUS/3.4.0-foss-2019b
- bam_to_mate_hist/2018.09-intel-2018a-Python-2.7.14
- bam_to_mate_hist/2018.11-intel-2018a-Python-2.7.14
- BayeScan/2.1-intel-2018a
- bcl2fastq2/2.18.0.12
- bcl2fastq2/2.19.0
- BEDTools/2.26.0
- BEDTools/2.29.2-GCC-8.3.0
- BEDTools/2.30.0-iccifort-2019b
- BLAST/2.11.0-Linux_x86_64
- BLAST/2.2.26
- BLAST/2.6.0
- BLAST/2.11.0-Linux_x86_64
- BLAST+/2.7.1-foss-2017b-Python-2.7.14
- BLAST+/2.7.1-intel-2018a
- BLAST+/2.11.0-gompi-2019b
- BLAST+/2.13.0-gompi-2019b
- BLAT/3.5
- BamTools/2.4.0
- BamTools/2.4.1-intel-2018a
- BamTools/2.5.1-intel-2018a
- BamTools/2.5.1-foss-2019b
- BamTools/2.5.1-GCC-8.3.0
- BamTools/2.5.1-iccifort-2019b
- BBMap/38.61b-foss-2017b
- BCFtools/1.3.1
- BCFtools/1.9-foss-2019b
- BCFtools/1.6
- BCFtools/1.15.1-GCC-8.3.0
- Beast/2.4.5
- Beast/2.6.3-GCC-8.3.0
- BioPerl/1.7.0
- BioPerl/1.7.2-foss-2017b-Perl-5.26.0
- BioPerl/1.7.8-GCCcore-8.3.0
- Biopython/1.68
- Biopython/1.71-intel-2018a-Python-3.7.0
- Biopython/1.71-intel-2018a-Python-2.7.14
- Biopython/1.73-foss-2017b-Python-3.6.3
- Biopython/1.78-foss-2019b-Python-3.7.4
- Bowtie/1.1.2
- Bowtie/1.2.2-intel-2018a
- Bowtie2/2.2.9
- Bowtie2/2.3.2-intel-2017a
- Bowtie2/2.3.4.1-intel-2018a
- Bowtie2/2.3.4.3-foss-2017b
- Bowtie2/2.3.5.1-GCC-6.4.0-2.28
- Bowtie2/2.3.5.1-iccifort-2019b
- Bowtie2/2.4.1-GCC-8.3.0
- BRAKER2/2.1.2
- BRAKER2/2.1.4
- BRAKER2/2.1.6-foss-2019b-Python-3.7.4-GeneMark-EX-4.69
- bwa.kit/0.7.12
- bwa.kit/0.7.17
- BWA/0.7.17-GCC-8.3.0
- BWA/0.7.17-GCC-8.3.0
- BWA/0.7.17-GCCcore-8.3.0
- bwa-mem2/2.0pre1-GCCcore-6.4.0
- CESAR/2.0-intel-2019b_25-08-2020
- CONCOCT/1.1.0-foss-2019b-Python-3.7.4
- CONCOCT/1.1.0-intel-2019b-Python-3.7.4
- caffe_unet/99bd99795d-intel-2016b-Python-2.7.12
- canu/1.7-intel-2016b
- canu/1.8-foss-2017b-Perl-5.28.0
- canu/2.1.1-GCCcore-8.3.0
- cdbfasta/0.99-GCC-8.3.0
- CD-HIT/4.6.4
- CD-HIT/4.8.1-GCC-8.3.0
- CD-HIT/4.8.1-iccifort-2019b
- CellRanger/6.1.1
- CESAR/2.0-intel-2019b_25-08-2020
- Centrifuge/1.0.4-iimpi-2019b
- CheckM/1.1.2-foss-2019b-Python-3.7.4
- CheckM/1.1.2-intel-2019b-Python-3.7.4
- CheckM/1.1.10-foss-2019b-Python-3.7.4
- ConnectomeWorkbench /1.3.2-GCCcore-8.3.0
- ConnectomeWorkbench /1.5.0-GCCcore-8.3.0
- cutadapt/1.9.1
- DendroPy/4.5.2-GCCcore-8.3.0
- discovardenovo/52488
- DIAMOND/2.0.9-GCC-8.3.0
- DIAMOND/2.0.9-GCCcore-8.3.0
- Exonerate/2.4.0-foss-2017b
- Exonerate/2.4.0-intel-2018a
- Exonerate/2.4.0-GCC-8.3.0
- FastANI/1.33-GCC-8.3.0
- FastANI/1.33-iccifort-2019b
- FASTX-Toolkit/0.0.14
- FastQC/0.11.5
- FASTA/36.3.8h-GCCcore-6.4.0
- FASTA/36.3.5e-GCCcore-6.4.0
- FastTree/2.1.11-GCCcore-8.3.0
- FreeSurfer/6.0.1
- FreeSurfer/7.1.0
- FreeSurfer/7.3.0
- FreeSurfer/7.3.2
- FSL/6.0.0-foss-2017b
- FSL/6.0.3-foss-2019b-Python-3.7.4
- FSL/6.0.4-fosscuda-2019b-Python-3.7.4
- FSL/6.0.4-fosscuda-2019-EDDY
- FSL/6.0.5.1-fosscuda-2019b
- fsl_sub/6.0.3-foss-2019b-Python-3.7.4
- FSL/6.0.6.2
- GATK/3.7-Java-8.112
- GATK/4.1.4.1-GCCcore-8.3.0-Java-8
- GATK/4.1.8.1-GCCcore-8.3.0-Java-8
- GeneMark-EX/4.33
- GeneMark-EX/4.69-GCCcore-8.3.0
- genomescope/v2-2020.03-foss-2019b-R-4.0.2
- GenomeThreader/1.7.1-Linux_x86_64-64bit
- GenomeThreader/1.7.3-Linux_x86_64-64bit
- genometools/1.5.10-foss-2017b
- GenomeTools/1.6.1-GCC-8.3.0
- GffCompare/0.10.1-foss-2017b
- GffCompare/0.10.6-foss-2017b
- gffread/0.9.12-foss-2017b
- GROMACS/5.1.4-intel-2016b-mt
- GROMACS/2021.5-fosscuda-2022.07
- hapflk/1.4-intel-2019b-Python-2.7.16
- HTSlib/1.5-intel-2017a
- HTSlib/1.8-foss-2017b
- HTSlib/1.8-intel-2018a
- HTSlib/1.9-foss-2017b
- HTSlib/1.9-foss-2019b
- HTSlib/1.10.2-GCC-8
- HTSlib/1.12-GCC-8.3.0.3.0
- HTSlib/1.15.1-GCC-8.3.0
- HISAT2//2.1.0-intel-2018a
- HMMER/3.2.1-foss-2017b
- HMMER/3.3.2-gompi-2019b
- IGV/2.3.80
- IGV/2.11.1-Java-11
- IGVTools/2.3.75
- IGVTools/2.4.19-Java-11
- Infernal/1.1.4-GCCcore-8.3.0
- illumina-utils/2.12-foss-2019b-Python-3.7.4
- illumina-utils/2.12-intel-2019b-Python-3.7.4
- ipyrad/0.9.62-foss-2019b-Python-3.7.4
- IsoSeq3/3.4.0
- IsoSeq3/3.3.0
- IQ-TREE/1.6.12-foss-2019b
- IQ-TREE/2.1.3-foss-2019b
- IQ-TREE/2.1.3-intel-2019b
- Jellyfish/1.1.12-intel-2019b
- Jellyfish/2.3.0-GCC-8.3.0
- Kent_tools/401-gompi-2019b
- KNIME
- Kaldi/5.5-fosscuda-2019b_2021.07
- Kaiju/1.9.2-GCCcore-8.3.0
- kallisto/0.46.1-foss-2019b
- KrakenUniq/1.0.3-GCCcore-8.3.0
- KrakenUniq/1.0.3-gompi-2019b
- KrakenUniq/1.0.3-intel-2019b
- LACHESIS/2017.12-foss-2019b
- Lighter/1.0
- lpsolve/5.5.2.5-intel-2016b
- lpsolve/5.5.2.5-intel-2018a
- lpsolve/5.5.2.5-GCC-8.3.0
- LTR_retriever/2.9.0-foss-2019b
- Lumpy/0.1
- MAFFT/7.475-GCC-8.3.0-with-extensions
- MaSuRCA/3.2.4-GCCcore-6.4.0
- MaSuRCA/3.3.0-foss-2017b-Perl-5.26.0
- MaSuRCA/4.1.3-foss-2019b-R-4.1.0
- MCL/14.137-foss-2017b
- MCScanX /10.2020-GCCcore-8.3.0
- medaka/0.9.2-foss-2017b-Python-3.6.3
- medaka/0.10.1-foss-2017b-Python-3.6.3
- MEGAHIT/1.2.9-GCCcore-8.3.0
- MetaBAT/2.15-gompi-2019b
- Mindboggle/1.2.4-foss-2017b-Python-3.6.3
- minimap2/2.13-foss-2017b
- minimap2/2.22-GCCcore-8.3.0
- MIRTK/2020.04-foss-2019b
- Mothur/1.48.0-foss-2019b-Python-3.7.4
- MrBayes/3.2.6-foss-2017b
- MRtrix/3.0.3-intel-2019b-Python-3.7.4
- MRtrix/3.0.2-intel-2019b-Python-3.7.4
- MultiQC/1.7-intel-2018a-Python-3.6.3
- MUSCLE/3.8.31-GCC-8.3.0
- MUSCLE/3.8.1551-GCC-8.3.0
- ncbi-vdb/2.11.2-iimpi-2019b
- ncbi-genome-download/0.3.1-GCCcore-8.3.0
- NextGenMap/0.5.2
- NextGenMap/0.5.5-intel-2016b
- nQuire/2018.04-GCCcore-8.3.0
- NSEG/1.0-GCCcore-6.4.0
- NSEG/1.0-GCCcore-8.3.0
- OMA/2.5.0-GCCcore-8.3.0
- PEST++/4.2.14-intel-2018a
- PEST++/4.2.14-dev-intel-2018a
- picard/2.6.0-Java-11
- picard/2.9.0
- picard/2.22.3-Java-11
- Pilon/1.23-Java-11
- pplacer/1.1.alpha19
- Pychopper/0.4.0-intel-2018a-Python-3.7.0
- Pysam/0.15.2-GCC-6.4.0-2.28
- Pysam/0.15.3-GCC-6.4.0-2.28
- QUAST / QUAST-LG
- R-bundle-Bioconductor/3.9-foss-2019b-R-4.0.2
- R-bundle-Bioconductor/3.12-foss-2019b-R-4.0.2
- Racon/1.4.7-GCCcore-6.4.0
- RAxML-NG/1.1.0-GCC-8.3.0
- RAxML-NG/1.1.0-GCC-8.3.0-OpenMPI
- RAxML-NG/1.1.0-GCC-8.3.0-MPI-enabled
- RAxML/8.2.12-iimpi-2019b-hybrid-avx2
- RECON/1.08-foss-2017b
- RECON/1.08-foss-2019b-RepeatModeler
- RepeatMasker/4.0.7-foss-2017b
- RepeatMasker/4.0.8-foss-2017b-Perl-5.28.0-HMMER
- RepeatMasker/4.0.9-p2-gompi-2019b-HMMER
- RepeatMasker/4.1.2-p1-foss-2019b-HMMER
- RepeatModeler/1.0.11-foss-2017b
- RepeatModeler/2.0.2a-foss-2019b
- RepeatModeler/2.0.3-foss-2019b
- RepeatScout/1.0.5-GCCcore-6.4.0
- RepeatScout/1.0.5-GCCcore-8.3.0
- RepeatScout/1.0.6-GCC-8.3.0
- RMBlast/2.10.0-gompi-2019b
- REPET/2.5-foss-2017b-Python-2.7.14
- RSEM/1.3.1-intel-2018a
- Salmon/0.11.2-intel-2018a-Python-2.7.14
- Salmon/0.11.3-foss-2017b-Python-2.7.14
- Salmon/1.3.0-gompi-2019b
- SAMtools/0.1.19-foss-2019b
- SAMtools/1.3.1
- SAMtools/1.7
- SAMtools/1.8
- SAMtools/1.9-foss-2017b
- SAMtools/1.9-GCC-8.3.0
- SAMtools/1.10-iccifort-2019b
- seqtk/1.3-r117-dirty-GCC-8.3.0
- SeqKit/2.3.1
- SHAPEIT4/4.2.2-foss-2019b
- SNAP/1.0beta.23-foss-2017b
- SNAP-HMM/2013-11-29-GCCcore-6.4.0
- SNAP-HMM/20190603-GCC-8.3.0
- SOAPdenovo2/r240
- SPAdes/3.15.3-GCC-8.3.0-Python-3.7.4
- spaln/2.4.03-GCC-8.3.0
- spaln/2.4.6-GCC-8.3.0
- Stacks/1.42
- Stacks/2.1-foss-2016b
- Stacks/2.1-intel-2018a
- Stacks/2.4-intel-2018a
- Stacks/2.4.1-foss-2017b
- Stacks/2.57-iccifort-2019b
- Stacks/2.62-foss-2019b
- STAR/2.5.4b-intel-2016b
- STAR/2.6.1 d-foss-2017b
- STAR/2.7.10a-GCC-8.3.0
- StringTie/1.3.5-GCCcore-6.4.0
- survival/3.2-7-foss-2019b-R-4.0.2
- tabix/0.2.6
- TRUFFLE/1.38
- TopHat/2.1.1
- TransDecoder/5.5.0-intel-2019b-Perl-5.30.0
- TRF/4.09.1-linux64
- Trimmomatic/0.36
- Trinity/2.2.0
- Trinity/2.4.0
- Trinity/2.6.6
- Trinity/2.8.4
- Trinity/2.14.0-foss-2019b-Python-3.7.4
- tRNAscan-SE/2.0.11-GCCcore-8.3.0
- trimAl/1.4.1-GCCcore-8.3.0
- TOGA/1.0-intel-2019b-Python-3.7.4
- Unet/2019.02-intel-2018a-Python-3.6.3
- VCFTools/0.1.14
- VCFTools/0.1.16
- vmatch/2.3.1
- VSEARCH/2.14.2-foss-2019b
- ViennaRNA/2.3.1
- AMR-Wind/2022.09.12-intel-2019b
- AMR-Wind/2022.09.12-intel-2019b
- ESMF/7.0.0
- ESMF/7.1.0r
- CGNS/4.1.2-intel-2019b
- GMT/5.3.1
- OpenFOAM/1.7.1
- OpenFOAM/2.1.1
- OpenFOAM/2.3.1
- OpenFOAM/2.4.0
- OpenFOAM/3.0.1
- OpenFOAM/4.0
- OpenFOAM/4.1-gcc
- OpenFOAM/4.1-se
- OpenFOAM/4.1 (D)
- OpenFOAM-Extend/3.2
- OpenFOAM-Extend/4.0-gimkl-2018a
- OpenFOAM/2.4.0-gimkl-201
- OpenFOAM/2.4.0-gimkl-2018a
- OpenFOAM/5.0-gimkl-2018a
- OpenFOAM/6-gimkl-2018a
- OpenFOAM/7-gimkl-2018a
- OpenFOAM/5-gimkl-2019b
- OpenFOAM/6-gimkl-2019b
- OpenFOAM/7-gimkl-2019b
- OpenFOAM/8-gimkl-2019b
- OpenFOAM/9-gimkl-2019b
- OpenFOAM/v1912-foss-2019b
- OpenFOAM-Plus/1906-gimkl-2018a
- OpenFOAM-Plus/1912-gimkl-2018a
- OpenFOAM-Plus/1912-gimkl-2019b
- OpenFOAM-Plus/2006-gimkl-2018a
- OpenFOAM-Plus/2006-gimkl-2019b
- OpenFOAM-Plus/2012-gimkl-2019b
- OpenFOAM-Plus/2106-gimkl-2019b
- OpenFOAM/v1912-foss-2019b
- OpenFOAM/v1912-intel-2019b
- OpenFOAM/v2112-foss-2019b
- OpenFOAM/v2112-gomkl-2019b
- OpenFOAM/v2206-gimkl-2019b
- PALMDependencies/all
- ThetaDependencies/all
- UPP/11.0.0-intel-2019b
- WPS/3.6.1
- WPS/3.7.1
- WPS/3.8.0
- WPS/3.8.1
- WPS/3.9 (D)
- WPSGeodata/3.8 (D)
- WPS/1.2.1-intel-2018a-solar
- WPS/4.0-intel-2018a-dmpar
- WPS/4.0.1-intel-2018a-dmpar
- WPS/4.0.2-intel-2018a-dmpar
- WRF/3.6.1
- WRF/3.7.1
- WRF/3.8.0
- WRF/3.8.1
- WRF/3.9 (D)
- WRF/1.2.4-intel-2018a-solar
- WRF/3.6.1-intel-2018a
- WRF/4.0-intel-2018a
- WRF/4.0.1-intel-2018a
- WRF/4.0.2-intel-2018a
- WRFGeodata/all
- WRFGeodata/3.8
- WRFGeodata/4.0
- AIMAll/19.10.12-intel-2019b-linux_64bit
- CP2K/3.0
- CP2K/5.1
- CP2K/7.1-intel-2019b
- CP2K/8.2-gomkl-2019b
- CP2K/9.1-conda
- CP2K9.1-gomkl-2019b
- CP2K9.1-intel-2019b
- CP2K/2022.1-intel-2019b
- CP2K/2022.1-intel-2019b-FFTW-MKL-usempi
- CP2K/2022.1-intel-2019b-FFTW-MKL
- dftd3-lib/0.9-iccifort-2019b
- gaussian/g09.b01
- gaussian/g09.d01
- gaussian/g16.a03
- Libint/2.4.2-gompi-2019b
- Libint/2.4.2-iimpi-2019b
- Libint/2.5.0-gompi-2019b
- Libint/2.5.0-iimpi-2019b
- Libint/2.6.0-gompi-2019b
- Libint/2.6.0-iimpi-2019b
- Libint/2.6.0-gomkl-2019b-lmax-6-cp2k
- libvori/210412-GCCcore-8.3.0
- libvori/220621-GCCcore-8.3.0
- libxc/4.3.4-GCC-8.3.0
- libxc/4.3.4-gompi-2019b
- libxc/4.3.4-iccifort-2019b
- libxc/5.0.0.a-gompi-2019b
- MOLGW/2.A-foss-2019b
- MOLGW/2.D-intel-2019b
- MOLGW/2.D-intel-2019b-mpi
- NAMD/2.12
- NAMD/2.14-fosscuda-2019b
- NAMD/2.15alpha1_2021-07-22-fosscuda-2019b
- NAMD/3.0alpha8-fosscuda-2019b-multicore-CUDA-SingleNode
- NAMD/3.0alpha8-fosscuda-2019b-netlrts-smp-CUDA-SingleNode
- NBO 2016/6.0
- ORCA/3.0.3
- ORCA/4.0.0
- ORCA/4.0.1.2
- pDynamo/1.9.0
- PLUMED/2.2.3
- QuantumESPRESSO/6.6-intel-2019b
- QuantumESPRESSO/6.7-iomkl-2019b
- Clang/9.0.1-GCC-8.3.0-CUDA-10.1.243
- CUDA-Toolkit/8.0.44
- CUDA-Toolkit/recent
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- PCRE2/10.33-GCCcore-8.3.0
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- PyTorch /1.4.0-fosscuda-2019b-Python-3.7.4
- PyTorch /1.6.0-fosscuda-2019b-Python-3.7.4
- PyTorch /1.7.0-fosscuda-2019b-Python-3.7.4
- PyTorch /1.9.0-fosscuda-2019b-Python-3.7.4
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- Mesa/17.2.5-foss-2017b
- Mesa/17.2.5-GCCcore-6.4.0
- Mesa/17.3.6-intel-2018a
- Mesa/18.1.1-GCCcore-6.4.0
- Mesa/19.0.1-GCCcore-6.4.0
- Mesa/19.1.4-GCCcore-6.4.0
- Mesa/20.0.2-GCCcore-8.3.0
- NiBabel/2.2.1-intel-2018a-Python-3.6.3
- NiBabel/3.2.0-foss-2019b-Python-3.7.4
- Nilearn/0.7.1-foss-2019b-Python-3.7.4
- OpenCV/3.1.0-intel-2016b
- OpenCV/3.3.0-foss-2017b-Python-3.6.3
- OpenCV/4.2.0-fosscuda-2019b-Python-3.7.4
- OpenCV/4.4.0-fosscuda-2019b-Python-3.7.4
- p4vasp/0.3.29-intel-2016b-Python-2.7.12
- p4vasp/0.3.30-Singularity
- ParaView/5.1.2-goolf-5.2.01-mpi
- ParaView/5.1.2-intel-2016b-mpi
- ParaView/5.6.2-foss-2019b-Python-3.7.4-mpi
- ParaView/5.6.2-intel-2019b-Python-3.7.4-mpi
- PCL/1.12.0-fosscuda-2019b-Python-3.7.4
- PyQt5/5.15.1-GCCcore-8.3.0
- scikit-image/0.17.1-fosscuda-2019b-Python-3.7.4
- scikit-image/0.13.0-intel-2016b-Python-2.7.12
- scikit-image/0.14.0-intel-2018a-Python-2.7.14
- scikit-image/0.14.0-intel-2018a-Python-3.6.3
- Tk/8.6.4-intel-2016b-no-X11
- Tk/8.6.5-gimpi-6.2016
- Tk/8.6.8-GCCcore-6.4.0
- torchvision/0.5.0-fosscuda-2019b-Python-3.7.4-PyTorch-1.4.0
- torchvision/0.7.0-fosscuda-2019b-Python-3.7.4-PyTorch-1.6.0
- torchvision/0.8.2-fosscuda-2019b-Python-3.7.4-PyTorch-1.7.0
- UDUNITS/2.2.20-intel-2016b
- gettext/0.19.8
- gnuplot/5.0.5-intel-2016b
- gnuplot/5.2.2-foss-2017b
- gnuplot/5.2.6-foss-2017b
- grace/5.1.25
- libICE/1.0.8-goolf-5.2.01
- libSM/1.2.1-goolf-5.2.01
- libX11/1.6.1-goolf-5.2.01
- libX11/1.6.3-intel-2016b
- libXaw/1.0.12-goolf-5.2.01
- libXpm/3.5.11-goolf-5.2.01
- libXt/1.1.4-goolf-5.2.01
- LittleCMS/2.9-GCCcore-6.4.0
- motif/2.3.6
- ncview/2.1.7-intel-2016b
- pixman/0.38.4-GCCcore-8.3.0
- Pillow-SIMD/6.0.x.post0-GCCcore-8.3.0
- PyCairo/1.10.0-intel-2016b-Python-2.7.12
- PyCairo/1.18.2-GCCcore-8.3.0
- PyCairo/1.19.1-GCCcore-8.3.0-Python-3.7.4
- PyGObject/2.28.6-intel-2016b-Python-2.7.12
- PyGObject/2.28.7-intel-2019b-Python-2.7.16
- PyGObject/3.34.0-GCCcore-8.3.0-Python-2.7.16
- PyGTK/2.24.0-intel-2016b-Python-2.7.12
- PyOpenGL/3.1.1a1-intel-2016b
- Togl/2.0-GCCcore-8.3.0
- VTK/8.1.0-intel-2018a-Python-2.7.14
- VTK/8.1.1-foss-2017b-Python-2.7.14
- VTK/8.2.0-foss-2019b-Python-3.7.4
- VTK/8.2.0-intel-2019b-Python-3.7.4
- VTK/9.0.1-fosscuda-2019b-Python-3.7.4
- VTK/9.0.1-fosscuda-2019b_master (more recent than 9.0.1 & bug-fixed)
- VTK/9.0.1-fosscuda-2019b-Qt5
- VTK/9.0.3-fosscuda-2019b-Qt5
- X11/20160819-goolf-5.2.01
- X11/20171023-GCCcore-6.4.0
- X11/20180604-GCCcore-6.4.0
- X11/20190311-GCCcore-6.4.0
- X11/20200222-GCCcore-8.3.0
- X11/20210518-GCCcore-8.3.0
- X11/all
- XCrySDen/1.6.2-intel-2019b
The list above is based on the information gathered by the command
module avail
If you want to create a list of every available software on the cluster, on your own, you can do this by simply using the command:
module spider
The available software will be listed in the format: name, version