Difference between revisions of "Installed Application Software and Libraries"

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This page was created to give you an overview of the installed software on the cluster (name'''/'''version). The list will be updated at least once per week.  
This page was created to give you an overview of the installed software on the cluster (name'''/'''version). The list will be updated at least once per week.  


If you find a program in this list, but cant find it on the cluster (for example when looking at the output of the command '''module avail''') it has most likely been hidden. Its also possible that a module isnt listed here because it is hidden. You can find every hidden module here: '''/cm/shared/uniol/modules/.hidden'''. If you want to access a hidden module, you have to add a "." in front of the version number, e.g.:
If you find a program in this list, but can't find it on the cluster (for example when looking at the output of the command '''module avail''') it has most likely been hidden. Its also possible that a module isn't listed here for the same reason. You can find every hidden module here: '''/cm/shared/uniol/modules/.hidden'''. If you want to access a hidden module, you have to add a "." in front of the version number, e.g.:
  [abcd1234@hpcl001 ~]$ module load '''PCRE/8.39-intel-2016b'''
  [abcd1234@hpcl001 ~]$ module load '''PCRE/8.39-intel-2016b'''
  Lmod has detected the following error:  The following module(s) are unknown: "PCRE/8.39-intel-2016b"
  Lmod has detected the following error:  The following module(s) are unknown: "PCRE/8.39-intel-2016b"
   
   
  Please check the spelling or version number. Also try "module spider ..."
  Please also double check spelling and the version number you typed in. Also try "module spider <name>" to include every software package on all environents. <br>
   
   
  [abcd1234@hpcl001 ~]$ module load '''PCRE/.8.39-intel-2016b'''
  [abcd1234@hpcl001 ~]$ module load '''PCRE/.8.39-intel-2016b'''
  [abcd1234@hpcl001 ~]$ ml  
  [abcd1234@hpcl001 ~]$ ml  
Line 15: Line 17:
   1) hpc-uniol-env  3) icc/2016.3.210  5) binutils/.2.26-GCCcore-5.4.0  7) impi/5.1.3.210  9) imkl/11.3.3.210  11) '''PCRE/.8.39-intel-2016b'''
   1) hpc-uniol-env  3) icc/2016.3.210  5) binutils/.2.26-GCCcore-5.4.0  7) impi/5.1.3.210  9) imkl/11.3.3.210  11) '''PCRE/.8.39-intel-2016b'''
   2) slurm/current  4) GCCcore/.5.4.0  6) ifort/2016.3.210              8) iimpi/2016b    10) intel/2016b
   2) slurm/current  4) GCCcore/.5.4.0  6) ifort/2016.3.210              8) iimpi/2016b    10) intel/2016b


== Latest installed programs and version updates ==
== Latest installed programs and version updates ==

Revision as of 16:23, 9 September 2021

Introduction

This page was created to give you an overview of the installed software on the cluster (name/version). The list will be updated at least once per week.

If you find a program in this list, but can't find it on the cluster (for example when looking at the output of the command module avail) it has most likely been hidden. Its also possible that a module isn't listed here for the same reason. You can find every hidden module here: /cm/shared/uniol/modules/.hidden. If you want to access a hidden module, you have to add a "." in front of the version number, e.g.: 

[abcd1234@hpcl001 ~]$ module load PCRE/8.39-intel-2016b
Lmod has detected the following error:  The following module(s) are unknown: "PCRE/8.39-intel-2016b"

Please also double check spelling and the version number you typed in. Also try "module spider <name>" to include every software package on all environents. 





[abcd1234@hpcl001 ~]$ module load PCRE/.8.39-intel-2016b
[abcd1234@hpcl001 ~]$ ml 

Currently Loaded Modules:
 1) hpc-uniol-env   3) icc/2016.3.210   5) binutils/.2.26-GCCcore-5.4.0   7) impi/5.1.3.210   9) imkl/11.3.3.210  11) PCRE/.8.39-intel-2016b
 2) slurm/current   4) GCCcore/.5.4.0   6) ifort/2016.3.210               8) iimpi/2016b     10) intel/2016b

Latest installed programs and version updates

To keep you up to date, all newly installed programs and version updates of the last two to three months (ca.) are listed in this section. Since early 2020, every new program is installed in the new environment hpc-env/8.3.


Software Version Toolchain Install Date (D/M/Y)
TransDecoder 5.5.0 intel/2019b 09/09/2021
CD-HIT 4.8.1 iccifort/2019b 09/09/2021
RStudio / RStudio-Server 1.4.1717 foss/2019b 08/09/2021
osrm 3.4.1 foss/2019b 08/09/2021
OMA 2.5.0 GCCcore/8.3.0 03/09/2021
FastANI 1.33 GCC/8.3.0 01/09/2021
Lua 5.3.5 GCCcore/2019b 01/09/2021
osrm-backend 5.25.0 foss/2019b 01/09/2021
MCScanX 10.2020 GCCcore/8.3.0 31/08/2021
Biopython 1.78 foss/2019b 25/08/2021
parallel 20210322 GCC/8.3.0 25/08/2021
SPAdes 3.15.3 GCC/8.3.0 24/08/2021
OpenFOAM 9 gimkl/2019b 20/08/2021
fluka 2021.2.1 SYSTEM 19/08/2021
canu 2.1.1 GCCcore/8.3.0 13/08/2021
minimap2 2.22 GCCcore/8.3.0 13/08/2021
SALOME 9.7.0 GCCcore/8.3.0 10/08/2021
ElmerFEM 9.0 foss/2019b 29/07/2021
SCOTCH 6.0.9 gimkl & gompi 29/07/2021
Mmg 5.5.2 foss/2019b 29/07/2021

Installed Software

/cm/local/modulefiles

  • cluster-tools/7.3
  • cmd
  • dot
  • freeipmi/1.5.2
  • gcc/6.1.0
  • ipmitool/1.8.17
  • module-git
  • module-info
  • openldap
  • shared

/cm/shared/uniol/modules/core

  • hpc-uniol-env (L)
  • slurm/current (L)

/cm/shared/uniol/modules/bio

/cm/shared/uniol/modules/cfd

/cm/shared/uniol/modules/chem

  • CP2K/3.0
  • CP2K/5.1
  • CP2K/7.1-intel-2019b
  • CP2K/8.2-gomkl-2019b
  • gaussian/g09.b01
  • gaussian/g09.d01
  • gaussian/g16.a03
  • Libint/2.4.2-gompi-2019b
  • Libint/2.4.2-iimpi-2019b
  • Libint/2.5.0-gompi-2019b
  • Libint/2.5.0-iimpi-2019b
  • Libint/2.6.0-gompi-2019b
  • Libint/2.6.0-iimpi-2019b
  • libxc/4.3.4-GCC-8.3.0
  • libxc/4.3.4-gompi-2019b
  • libxc/4.3.4-iccifort-2019b
  • libxc/5.0.0.a-gompi-2019b
  • MOLGW/2.A-foss-2019b
  • MOLGW/2.D-intel-2019b
  • MOLGW/2.D-intel-2019b-mpi
  • NAMD/2.12
  • NAMD/2.14-fosscuda-2019b
  • NAMD/2.15alpha1_2021-07-22-fosscuda-2019b
  • NAMD/3.0alpha8-fosscuda-2019b-multicore-CUDA-SingleNode
  • NAMD/3.0alpha8-fosscuda-2019b-netlrts-smp-CUDA-SingleNode
  • NBO 2016/6.0
  • ORCA/3.0.3
  • ORCA/4.0.0
  • ORCA/4.0.1.2
  • pDynamo/1.9.0
  • PLUMED/2.2.3
  • QuantumESPRESSO/6.6-intel-2019b
  • QuantumESPRESSO/6.7-foss-2019b

/cm/shared/uniol/modules/compiler

  • Clang/9.0.1-GCC-8.3.0-CUDA-10.1.243
  • CUDA-Toolkit/8.0.44
  • CUDA-Toolkit/recent
  • GCC/4.9.4-2.25
  • GCC/5.4.0-2.26
  • GCC/6.2.0-2.27 (D)
  • Go/1.11.5
  • LLVM/3.8.1-goolf-5.2.01
  • LLVM/3.8.1-intel-2016b
  • LLVM/3.8.1-gimpi-6.2016
  • LLVM/3.9.0-intel-2016b
  • LLVM/5.0.0-foss-2017b
  • LLVM/5.0.0-GCCcore-6.4.0
  • LLVM/6.0.0-GCCcore-6.4.0
  • LLVM/7.0.0-GCCcore-6.4.0 (D)
  • LLVM/8.0.1-GCCcore-6.4.0
  • NAG_Fortran/5.2
  • PGI/12.10
  • PGI/15.10
  • PGI/16.10
  • PGI/19.10-GCC-8.3.0
  • icc/2016.3.210
  • ifort/2016.3.210

/cm/shared/uniol/modules/data

  • AMICO/1.2.9-intel-2019b-Python-3.7.4
  • ANTs/2.2.0-foss-2017b-Python-2.7.14
  • ANTs/2.2.0-foss-2017b-Python-3.6.3
  • ANTs/2.2.0-foss-2017b-Python-3.7.0
  • CDO/1.7.2-intel-2016b
  • concaveman/1.0.0-intel-2018a-R-3.6.1
  • dakota/6.10.0
  • DBD-Pg/3.14.2-foss-2019b-Perl-5.30.0
  • DB_File/1.835-GCCcore-8.3.0
  • detectron2/0.3-fosscuda-2019b-Python-3.7.4
  • dask/2.8.0-fosscuda-2019b-Python-3.7.4
  • dmipy/1.0.5-foss-2019b-Python-3.7.4
  • File-Which/1.27-GCCcore-8.3.0
  • Fiona/1.8.13-foss-2019b-Python-3.7.4
  • Fiona/1.8.13-fosscuda-2019b-Python-3.7.4
  • GDAL/3.0.2-foss-2019b-Python-3.7.4
  • GDAL/3.0.2-fosscuda-2019b-Python-3.7.4
  • h5py/2.7.1-intel-2018a-Python-3.6.3
  • h5py/2.8.0-foss-2017b-Python-3.6.3
  • h5py/2.9.0-fosscuda-2019b-Python-3.7.4
  • h5py/2.10.0-foss-2019b-Python-3.7.4
  • h5py/2.10.0-fosscuda-2019b-Python-3.7.4
  • HDF/4.2.11-intel-2016b
  • HDF/4.2.12-gimkl-7.2017.3
  • HDF/4.2.12-goolf-7.2.11
  • HDF5/1.8.17-intel-2016b
  • HDF5/1.10.1-foss-2017b
  • HDF5/1.10.1-intel-2018a
  • HDF5/1.10.2-gimkl-2018a
  • HDF5/1.10.2-intel-2018a
  • HDF5/1.10.5-intel-2018a
  • HDF5/1.10.5-gompi-2019b
  • HDF5/1.10.5-gompic-2019b
  • HDF5/1.10.5-iimpi-2019b
  • HDF5/1.12.0-iomkl-2019b
  • MariaDB/10.3.10-foss-2017b
  • merra2wrf/2.0
  • NCL/6.3.0-intel-2016b
  • g2clib/1.4.0-intel-2016b
  • g2lib/1.4.0-intel-2016b
  • geopandas/0.8.1-foss-2019b-Python-3.7.4
  • geopandas/0.8.1-fosscuda-2019b-Python-3.7.4
  • grib_api/1.16.0-intel-2016b
  • ITK /4.13.1-foss-2017b-Python-2.7.14
  • ITK /4.13.2-foss-2017b-Python-3.6.3
  • ITK /4.13.2-foss-2017b-Python-3.7.0
  • ITK /5.0.1-foss-2019b-Python-3.7.4
  • netCDF/4.4.1-intel-2016b
  • netCDF/4.4.1-intel-2016b-with-HDF4
  • netCDF-Fortran/4.4.4-intel-2016b
  • netCDF-Fortran/4.4.4-intel-2016b-with-HDF4
  • netCDF/4.6.1-gimkl-2018a
  • netCDF/4.6.1-intel-2018a
  • netCDF4.7.1-gompi-2019b
  • netCDF4.7.1-gompic-2019b
  • netCDF4.7.1-iimpi-2019b
  • netCDF/4.8.0-gompi-2019b
  • netCDF-Fortran/4.4.4-intel-2018a
  • netCDF-Fortran4.5.2-gompi-2019b
  • netCDF-Fortran/4.5.2-iimpi-2019b
  • netCDF-C++/4.3.0-intel-2018a
  • osrm-backend/5.25.0-foss-2019b
  • osrm/3.4.1-foss-2019b-R-4.1.0-2021.06
  • ParallelIO/2.5.2-intel-2019b
  • PostgreSQL/12.6-GCCcore-8.3.0
  • PyTables/3.5.1-foss-2017b-Python-2.7.14
  • PyTables/3.5.1-foss-2017b-Python-3.6.3
  • pyproj/2.4.2-GCCcore-8.3.0-Python-3.7.4
  • rgdal/1.5-23-foss-2019b-R-4.1.0
  • ROOT/v5.34.36
  • ROOT/v6.08.02
  • ROOT/6.20.04-foss-2019b-Python-3.7.4
  • ROOT/6.22.06-foss-2019b-Python-3.7.4
  • ROOT/6.22.06-fosscuda-2019b-Python-3.7.4
  • RStan/2.19.2-intel-2018a-R-3.6.1
  • SALOME/9.7.0-GCCcore-8.3.0-Python-3.7.4
  • scikit-learn/0.23.2-intel-2019b-Python-3.7.4
  • scikit-learn/0.23.2-fosscuda-2019b-Python-3.7.4
  • XML-LibXML/2.0206-GCCcore-8.3.0

/cm/shared/uniol/modules/devel

  • Advisor/2019.2
  • ALE/0.6.0-GCCcore-6.4.0
  • Autoconf/2.69-gimpi-6.2016
  • Autoconf/2.69-gimpi-6.2016
  • Automake/1.15
  • Automake/1.16.1-GCCcore-6.4.0
  • Automake/1.16.2-GCCcore-8.3.0
  • Autotools/20150215
  • Autotools/20150215-gimpi-6.2016
  • Autotools/20170619-GCCcore-6.4.0
  • Autotools/20180311-GCCcore-6.4.0
  • Autotools/20180311-GCCcore-8.3.0
  • Autotools/20200321-GCCcore-8.3.0
  • ant/1.10.1-Java-1.8.0_172
  • ant-1.10.7-Java-11
  • Bazel/0.11.1-GCCcore-6.4.0
  • Bazel/0.20.0-GCCcore-6.4.0
  • Bazel/0.20.0-GCCcore-8.3.0
  • Bazel/0.26.1-foss-2017b-Python-3.6.3
  • Bazel/0.29.1-foss-2017b-Python-3.6.3
  • Bazel/0.29.1-GCCcore-8.3.0
  • Boost/1.61.0-gimpi-6.2016
  • Boost/1.61.0-goolf-5.2.01
  • Boost/1.61.0-intel-2016b
  • Boost/1.63.0-intel-2018a
  • Boost/1.64.0-intel-2017a
  • Boost/1.65.1-foss-2017b-Python-3.6.3
  • Boost/1.66.0-intel-2018a
  • Boost/1.67.0-foss-2017b-Python-2.7.14
  • Boost/1.71.0-iimpi-2018a
  • Boost/1.71.0-intel-2018a-Python-2.7.14
  • Boost/1.71.0-gompi-2019b
  • Boost/1.72.0-gimkl-2019b
  • Boost/1.72.0-gompi-2019b
  • Boost/1.72.0-iimpi-2019b
  • Boost/1.74.0-GCC-8.3.0
  • Boost.Python/1.64.0-gompi-2019b
  • Boost.Python/1.71.0-iimpi-2019b
  • Boost.Python/1.71.0-gompi-2019b
  • Boost.Python/1.72.0-gompi-2019b
  • Boost.Python/1.72.0-iimpi-2019b
  • catkin/0.7.14-foss-2017b-Python-2.7.14
  • catkin-dep/1.0-foss-2017b-Python-2.7.14
  • CMake/2.8.12
  • CMake/3.6.2 (D)
  • CMake/3.5.2-gimpi-6.2016
  • CMake/3.6.1-gimpi-6.2016
  • CMake/3.9.1-GCCcore-6.4.0
  • CMake/3.9.5-GCCcore-6.4.0
  • CMake/3.12.1-GCCcore-6.4.0
  • CMake/3.13.3-GCCcore-6.4.0
  • CMake/3.15.2-GCCcore-6.4.0
  • CUDA-Profiler/8.0.44
  • CUDA-Visual-Profiler/8.0.44
  • Cube/4.3.4
  • flatbuffers/1.12.0-GCCcore-8.3.0
  • GObject-Introspection/1.52.0-intel-2016b
  • gflags/2.2.2-GCCcore-6.4.0
  • glog/0.4.0-GCCcore-6.4.0
  • glew/2.1.0-GCCcore-8.3.0
  • glew/2.1.0-fosscuda-2019b
  • gtest/1.8.0-GCCcore-6.4.0
  • intltool/0.51.0-foss-2017b-Perl-5.26.0
  • intltool/0.51.0-GCCcore-6.4.0-Perl-5.26.0
  • intltool/0.51.0-intel-2018a-Perl-5.26.0
  • intltool/0.51.0-intel-2018a-Perl-5.28.0
  • intltool/0.51.0-intel-2018a
  • LevelDB/1.22-GCCcore-6.4.0
  • libXmu/1.1.2-goolf-5.2.01
  • libsigc++/2.10.2-GCCcore-8.3.0
  • libsigc++/3.0.3-GCCcore-8.3.0
  • LZO/2.10-foss-2017b
  • M4/1.4.17
  • M4/1.4.17-gimpi-6.2016
  • Mako/1.0.4-gimpi-6.2016-Python-2.7.12
  • Mako/1.0.7-foss-2017b-Python-3.6.3
  • Mako/1.0.7-intel-2018a-Python-2.7.14
  • Mako/1.0.8-intel-2018a-Python-2.7.14
  • Mako/1.0.8-intel-2018a-Python-3.7.0
  • Mako/1.1.0-GCCcore-8.3.0
  • makedepend/1.0.6
  • makedepend/1.0.6-GCCcore-8.3.0
  • ncurses/6.0
  • ncurses/6.0-gimpi-6.2016
  • Nvidia-Tesla-GDK/352.79
  • nsync/1.24.0-GCCcore-8.3.0
  • OTF2/2.0
  • PCRE/8.40
  • PCRE2/10.33-GCCcore-6.4.0
  • protobuf-python/3.4.0-intel-2018a-Python-2.7.14
  • protobuf-python/3.4.0-intel-2018a-Python-3.6.3
  • protobuf-python/3.10.0-fosscuda-2019b-Python-3.7.4
  • protobuf/3.4.0-intel-2018a
  • protobuf/3.7.1-GCCcore-6.4.0
  • protobuf/3.6.1.2-GCCcore-8.3.0
  • protobuf/3.9.2-GCCcore-8.3.0
  • protobuf/3.10.0-GCCcore-8.3.0
  • pkg-config/0.29.1-gimpi-6.2016
  • pkgconfig/1.2.2-intel-2018a-Python-3.6.3
  • pkgconfig/1.5.1-foss-2017b-Python-3.6.3
  • pkgconfig/1.5.1-GCCcore-8.3.0-Python-3.7.4
  • Qt/4.8.7-goolf-5.2.01
  • Qt/4.8.7-intel-2016b
  • Qt5/5.8.0-GCCcore-6.4.0
  • Qt5/5.12.1-foss-2017b
  • Qt5/5.13.1-GCCcore-6.4.0
  • ROS/1.14.4-foss-2017b-Python-2.7.14
  • PyTorch /1.0.1-foss-2017b-Python-3.6.3
  • PyTorch /1.4.0-fosscuda-2019b-Python-3.7.4
  • PyTorch /1.6.0-fosscuda-2019b-Python-3.7.4
  • PyTorch /1.7.0-fosscuda-2019b-Python-3.7.4
  • SCons/3.0.5-intel-2018a-Python-3.6.3
  • sparsehash/2.0.3-GCCcore-6.4.0
  • sparsehash/2.0.3-GCCcore-8.3.0
  • SQLite/3.9.2-intel-2016b
  • SQLite/3.13.0-goolf-5.2.01
  • SQLite/3.13.0-intel-2016b
  • SQLite/3.19.3
  • SQLite/3.20.1-GCCcore-6.4.0
  • SQLite/3.23.0-intel-2018a
  • SQLite/3.28.0-GCCcore-6.4.0
  • SQLite/3.23.0-GCCcore-8.3.0
  • SQLite/3.29.0-GCCcore-8.3.0
  • SQLite/3.35.4-GCCcore-8.3.0
  • Spark/2.4.0-intel-2018a-Hadoop-2.7
  • SWIG/3.0.8-intel-2016b-Python-2.7.12
  • SWIG/3.0.12-Python-3.6.1
  • SWIG/4.0.1-GCCcore-8.3.0
  • Scalasca/2.3
  • Valgrind/3.12.0
  • xbitmaps/1.1.1
  • xcb-proto/1.7-goolf-5.2.01-Python-2.7.3
  • xextproto/7.2.1-goolf-5.2.01
  • xproto/7.0.23-goolf-5.2.01
  • xproto/7.0.31-GCCcore-8.3.0
  • xproto/7.0.31
  • xtrans/1.2-goolf-5.2.01
  • xorg-macros/1.19.0

/cm/shared/uniol/modules/lang

  • Anaconda3/4.3.0
  • Anaconda3/5.1.0
  • Anaconda3/5.3.0
  • Anaconda3/2020.11
  • Anaconda3/2021.05
  • Bison/3.0.4
  • Bison/3.3.2
  • Bison/3.5.3
  • Bison/3.0.4-gimpi-6.2016
  • Bison/3.3.2-GCCcore-8.3.0
  • Bison/3.6.1-GCCcore-8.3.0
  • Gurobi/7.0.2
  • flex/2.6.0-gimpi-6.2016
  • flex/2.6.4-GCCcore-6.4.0
  • Java/8.112
  • Java/1.8
  • Java-1.8.0_231
  • Java/1.8.0_172
  • Java/1.8.0_192
  • Java/11.0.2
  • Julia/1.0.1-intel-2018a-Perl-5.28.0
  • Julia/1.0.5-LTS-linux-x86_64
  • Julia/1.6.1-linux-x86_64
  • Lua/5.1.5-GCCcore-8.3.0
  • Lua/5.3.5-GCCcore-8.3.0
  • Miniconda3/4.9.2
  • nodejs/4.4.7-intel-2016b
  • nodejs/10.15.3-GCCcore-6.4.0
  • nodejs/12.16.1-GCCcore-8.3.0
  • numba/0.47.0-foss-2019b-Python-3.7.4
  • Perl/5.20.3
  • Perl/5.26.0-foss-2017b
  • Perl/5.26.0-GCCcore-6.4.0
  • Perl/5.28.0-GCCcore-6.4.0
  • Python/2.7.3-goolf-5.2.01
  • Python/2.7.11-intel-2016b
  • Python/2.7.12
  • Python/2.7.14-intel-2018a
  • Python/2.7.14-foss-2017b
  • Python/3.5.2 (D)
  • Python/3.6.1-goolf-5.2.01
  • Python/3.6.3-foss-2017b
  • Python3.6.3-intel-2018a
  • Python/3.7.0-foss-2017b
  • Python/3.7.0-intel-2018a
  • R/3.3.1
  • R/3.4.3
  • R/3.5.2
  • R/3.6.1
  • R/4.0.2-foss-2019b
  • R/4.0.2-foss-2019b-2021.06
  • RStudio/1.2.5019-intel-2018a
  • RStudio/1.4.1106-foss-2019b-Java-11-R-4.0.2
  • RStudio/1.4.1717-foss-2019b-Java-11-R-4.1.0-2021.06
  • RStudio-Server/1.4.1717-foss-2019b-Java-11-R-4.1.0-2021.06
  • ScientificPython/2.9.4-Python-2.7.12 (D)
  • SciPy-bundle/2019.10-foss-2019b-Python-2.7.16
  • SciPy-bundle/2019.10-foss-2019b-Python-3.7.4
  • SciPy-bundle/2019.10-fosscuda-2019b-Python-3.7.4
  • SciPy-bundle/2019.10-intel-2019b-Python-3.7.4
  • SciPy-bundle/2020.11-foss-2019b-Python-3.7.4
  • SciPy-bundle/2020.11-fosscuda-2019b-Python-3.7.4
  • TCL/8.6.4-intel-2016b
  • TCL/8.6.5
  • TCL/Tcl/8.6.7-GCCcore-6.4.0
  • TCL/Tcl/8.6.8-GCCcore-6.4.0
  • Tkinter/2.7.14-foss-2017b-Python-2.7.14
  • Tkinter/2.7.14-intel-2018a-Python-2.7.14
  • Tkinter/3.6.3-intel-2018a-Python-3.6.3
  • Tkinter/3.7.4-GCCcore-8.3.0
  • Yasm/1.3.0

/cm/shared/uniol/modules/lib

  • Blosc/1.14.4-GCCcore-6.4.0
  • CFITSIO/3.410
  • CFITSIO/3.42-GCCcore-6.4.0
  • CFITSIO/3.47-GCCcore-8.3.0
  • CUDA-Blas/8.0.44
  • CUDA-FFT/8.0.44
  • double-conversion/3.1.4-GCCcore-6.4.0
  • double-conversion/3.1.4-GCCcore-8.3.0
  • double-conversion/3.1.5-GCCcore-8.3.0
  • FTGL/2.1.3-rc5-GCCcore-8.3.0
  • freeglut/3.0.0-foss-2017b
  • freeglut/3.0.0-GCCcore-6.4.0
  • freeglut/3.2.1-GCCcore-8.3.0
  • freeglut/3.2.1-GCCcore-8.3.0-Mesa-20.0.2
  • giflib/5.2.1-GCCcore-8.3.0
  • GlobalArrays/5.4b-intel-2016b
  • ICU/61.1-GCCcore-6.4.0
  • ICU/64.2-GCCcore-6.4.0
  • jemalloc/5.1.0-GCCcore-6.4.0
  • JsonCpp/1.9.3-GCCcore-8.3.0
  • lemon/1.2.1-GCCcore-6.4.0
  • libevent/2.1.8-GCCcore-6.4.0
  • libdrm/2.4.70-gimpi-6.2016
  • libdrm/2.4.100-GCCcore-8.3.0
  • libffi/3.2.1-gimpi-6.2016
  • libfabric/1.11.0-GCCcore-8.3.0
  • libglade/2.6.4-intel-2016b
  • libglvnd/1.2.0-GCCcore-8.3.0
  • libgpuarray/0.7.6-fosscuda-2019b-Python-3.7.4
  • libharu/2.3.0-intel-2016b
  • libiconv/1.16-GCCcore-8.3.0
  • libjpeg-turbo/1.5.2-GCCcore-6.4.0
  • libjpeg-turbo/2.0.2-GCCcore-6.4.0
  • libLBFGS/1.10-GCCcore-8.3.0
  • libtool/2.4.6
  • libtool/2.4.6-gimpi-6.2016
  • libpng/1.6.24
  • libpng/1.6.24-gimpi-6.2016
  • libreadline/6.3-gimpi-6.2016
  • libreadline/6.2-goolf-5.2.01
  • libreadline/7.0-GCCcore-6.4.0
  • libreadline/8.0-GCCcore-6.4.0
  • LibTIFF/4.0.10-GCCcore-8.3.0
  • libunwind/1.2.1-GCCcore-6.4.0
  • libunwind/1.3.1-GCCcore-8.3.0
  • libxcb/1.8-goolf-5.2.01-Python-2.7.3
  • libXft/2.3.2-intel-2016b
  • libxml2/2.9.4
  • libxml2/2.9.4-gimpi-6.2016
  • libxml2/2.9.9-GCCcore-8.3.0
  • libxml++/2.40.1-GCCcore-8.3.0
  • libXpm/3.5.11-goolf-5.2.01
  • libXpm/3.5.11-intel-2016b
  • libyaml/0.1.7-GCCcore-6.4.0
  • libyaml/0.2.2-GCCcore-6.4.0
  • LMDB/0.9.24-GCCcore-8.3.0
  • lz4/1.9.2-GCCcore-8.3.0
  • FLANN/1.9.1-foss-2019b-Python-3.7.4
  • mysqlclient/1.4.2-foss-2017b-Python-2.7.14
  • NCCL/2.4.8-gcccuda-2019b
  • nettle/3.2-gimpi-6.2016
  • nettle/3.3-GCCcore-6.4.0
  • nettle/3.4.1-GCCcore-6.4.0
  • NIfTI/2.0.0-GCCcore-8.3.0
  • NSPR/4.9-GCCcore-6.4.0
  • NSPR/4.20-GCCcore-6.4.0
  • NSPR/4.23-GCCcore-6.4.0
  • path.py/8.2.1-intel-2016b-Python-3.5.2
  • PMIx/3.1.5-GCCcore-8.3.0
  • pocl/1.4-GCCcore-8.3.0
  • pocl/1.4-gcccuda-2019b
  • PROJ/6.2.1-GCCcore-8.3.0
  • pybind11/2.4.3-GCCcore-8.3.0-Python-3.7.4
  • pyYAML//3.12-intel-2018a-Python-3.6.3
  • PyYAML/3.13-foss-2017b-Python-3.6.3
  • PyYAML/5.1-foss-2017b-Python-2.7.14
  • SDL2/2.0.8-GCCcore-6.4.0
  • SDL2/2.0.8-intel-2018a
  • snappy/1.1.7-intel-2018a
  • SIONlib/1.6.1
  • tbb/2018_U3-GCCcore-6.4.0
  • tbb/2019.4.199
  • tbb/2020.2-GCCcore-8.3.0
  • typing-extensions/3.7.4.3-GCCcore-8.3.0-Python-3.7.4
  • testpath/0.3-intel-2016b-Python-3.5.2
  • TensorFlow/1.7.0-intel-2018a-Python-3.6.3
  • TensorFlow/1.8.0-intel-2018a-Python-3.6.3
  • TensorFlow/1.13.1-foss-2017b-Python-3.6.3
  • TensorFlow/2.3.1-fosscuda-2019b-Python-3.7.4
  • TensorFlow/2.1.0-fosscuda-2019b-Python-3.7.4
  • TensorFlow/1.13.1-fosscuda-2019b-Python-3.7.4
  • Xerces-C++/3.1.3
  • Xerces-C++/3.2.3-GCCcore-8.3.0
  • xforms/1.2.4
  • zlib/1.2.7-goolf-5.2.01
  • zlib/1.2.8
  • zlib/1.2.8-gimpi-6.2016
  • zlib/1.2.11
  • zlib/1.2.11-GCCcore-6.4.0
  • zoltan/3.83
  • zstd/1.4.4-GCCcore-8.3.0
  • zstd/1.4.5-GCCcore-8.3.0
  • zstd/1.5.0-GCCcore-8.3.0

/cm/shared/uniol/modules/math

  • biomod2/3.4.6-foss-2019b-R-4.0.2
  • Eigen/3.2.9-gimpi-6.2016
  • Eigen/3.3.7
  • ELPA/2018.11.001-intel-2019b
  • ELPA/2019.11.001-intel-2019b
  • ELPA/2020.11.001-foss-2019b
  • bgc/1.03-intel-2018a
  • GEOS/3.8.0-GCC-8.3.0-Python-3.7.4
  • GEOS/3.8.1-GCC-8.3.0-Python-3.7.4
  • GMP/6.1.0-intel-2016b
  • GMP/6.1.1
  • Keras /2.1.5-intel-2018a-Python-3.6.3
  • Keras /2.2.4-foss-2017b-Python-3.6.3
  • Keras /2.2.4-fosscuda-2019b-Python-3.7.4
  • Keras /2.4.3-fosscuda-2019b-Python-3.7.4
  • magma/2.5.1-fosscuda-2019b
  • magma/2.5.4-fosscuda-2019b
  • Mmg/5.5.2-foss-2019b
  • MPFR/3.1.4
  • MPFR/4.0.2-GCCcore-8.3.0
  • METIS/5.1.0-gimpi-6.2016 (D)
  • NEURON/7.5-intel-2016b
  • NEURON/7.6.2-intel-2018a
  • numexpr/2.6.5-foss-2017b-Python-3.6.3
  • ParMETIS/4.0.3-foss-2019b
  • ParMETIS/4.0.3-iimpi-2019b
  • quanteda/2.1.0-foss-2019b-R-4.0.2
  • quanteda/2.1.2-foss-2019b-R-4.0.2
  • SCOTCH/6.0.4-gimpi-6.2016
  • SCOTCH/6.0.9-gimkl-2019b
  • SCOTCH/6.0.9-gompi-2019b
  • Shapely/1.7.0-GCC-8.3.0-Python-3.7.4
  • Theano/1.0.1-foss-2017b-Python-3.6.3
  • Theano/1.0.4-fosscuda-2019b-Python-3.7.4

/cm/shared/uniol/modules/mpi

  • OpenMPI/1.10.4-GCC-4.9.4
  • OpenMPI/2.0.1-GCC-5.4.0
  • OpenMPI/2.0.1-GCC-6.2.0
  • OpenMPI/2.0.2-GCC-5.4.0-2.26 (D)
  • OpenMPI/3.1.4-gcccuda-2019b
  • OpenMPI/4.0.5-iccifort-2019b
  • impi/5.1.3.210

/cm/shared/uniol/modules/numlib

  • ATLAS/3.10.2
  • Armadillo/7.500.1
  • Armadillo/10.3.0-gimkl-2019b
  • arpack-ng/3.7.0-foss-2019b
  • arpack-ng/3.7.0-gimkl-2019b
  • beagle-lib/3.1.2-GCC-8.3.0
  • CGAL/4.8.1-gimpi-6.2016
  • CGAL/4.14.1-foss-2019b-Python-3.7.4
  • CLHEP/2.1.3.1
  • CLHEP/2.2.0.4
  • CLHEP/2.3.1.1
  • CLHEP/2.3.4.3
  • CLHEP/2.4.1.0-foss-2017b
  • CLHEP/2.4.0.0-intel-2018a
  • CLHEP/2.4.1.3-foss-2019b
  • CLHEP/2.4.1.3-fosscuda-2019b
  • cuDNN/5.1-CUDA-8.0.44
  • cuDNN/7.6.4.38-gcccuda-2019b
  • cvx/2.1
  • Eigen/3.2.9
  • FFTW/3.3.5-gompi-5.2.01
  • FFTW-3.3.8-gompic-2019b
  • FFTW/3.3.8-gompi-2019b
  • FIAT/1.6.0-intel-2016b-Python-2.7.12
  • GMP/6.1.1 (D)
  • GSL/2.1-intel-2016b
  • GSL/2.3-goolf-6.2.01
  • GSL/2.3-intel-2016b
  • GSL/2.4-GCCcore-6.4.0
  • GSL/2.4-goolf-7.2.11
  • Hypre/2.11.1
  • imkl/11.3.3.210
  • leda/6.3
  • LinBox/1.4.0
  • maple/18
  • maple/2016 (D)
  • MATLAB/2016b
  • MATLAB/2017b
  • MATLAB/2018b
  • MATLAB/2019b
  • MPFR/3.1.4
  • NLopt/2.4.2-foss-2017b
  • NLopt/2.4.2-intel-2018a
  • NLopt/2.6.1-GCCcore-6.4.0
  • NTL/9.8.1
  • Octave/4.0.3
  • OpenBLAS/0.2.19
  • OpenBLAS/0.2.20-GCC-6.4.0-2.28
  • Qhull/2015.2
  • ScaLAPACK/2.0.2
  • ScaLAPACK/2.0.2-gompi-2019b
  • ScaLAPACK/2.0.2-gompic-2019b
  • SuiteSparse/4.5.3
  • SuiteSparse/4.5.3-intel-2018a-METIS-5.1.0
  • SuiteSparse/5.2.0-intel-2016b-METIS-5.1.0
  • SuiteSparse/5.2.0-intel-2018a-METIS-5.1.0
  • stata/13

/cm/shared/uniol/modules/phys

/cm/shared/uniol/modules/6.4/system

  • CUDA-Toolkit/8.0.61
  • CUDA-Toolkit/9.0.176
  • CUDA-Toolkit/9.1.85
  • CUDA/9.0.176
  • CUDA/9.1.85
  • CUDA-10.1.243-GCC-8.3.0
  • file/5.33-GCCcore-6.4.0
  • hwloc/1.11.8-GCCcore-6.4.0
  • OpenSSL/1.0.2t-GCCcore-6.4.0
  • OpenSSL/1.1.0h-GCCcore-6.4.0

/cm/shared/uniol/modules/toolchain

/cm/shared/uniol/modules/tools

  • ansys/18.0
  • bzip2/1.0.6-gimpi-6.2016
  • bokeh/1.4.0-fosscuda-2019b-Python-3.7.4
  • configurable-http-proxy/1.3.0-intel-2016b-nodejs-4.4.7
  • DB/18.1.32-GCCcore-8.3.0
  • EasyBuild/3.0.0
  • EasyBuild/3.6.1
  • EasyBuild/3.8.1
  • EasyBuild/3.9.0
  • EasyBuild/3.9.2
  • EasyBuild/3.9.3
  • EasyBuild/4.1.2
  • expat/2.2.0-gimpi-6.2016
  • expat/2.2.7-GCCcore-8.3.0
  • Ghostscript/9.19-intel-2016b
  • Ghostscript/9.27-GCCcore-6.4.0
  • gzip/1.10-GCCcore-8.3.0
  • IOzone/3.490-foss-2019b
  • IPython/6.5.0-foss-2019b-Python-3.7.4
  • IPython/7.13.0-foss-2019b-Python-3.7.4
  • git/2.23.0-GCCcore-8.3.0-nodocs
  • Inspector/2019.1
  • Meson/0.50.0-intel-2018a-Python-3.7.0
  • Meson/0.51.2-GCCcore-8.3.0-Python-3.7.4
  • Meson/0.55.1-GCCcore-8.3.0-Python-3.7.4
  • Nextflow/20.10.0
  • networkx/2.4-foss-2019b-Python-3.7.4
  • networkx/2.4-fosscuda-2019b-Python-3.7.4
  • Ninja/1.9.0-foss-2017b
  • Ninja/1.9.0-GCCcore-8.3.0
  • Ninja/1.10.0-GCCcore-8.3.0
  • NCO/4.6.0-intel-2016b
  • OSU-Micro-Benchmarks/5.6.2-gompi-2017b
  • parallel/20160622-GCC-5.4.0-2.26
  • parallel/20180422-intel-2018a
  • parallel/20190222-GCCcore-6.4
  • parallel/20210322-GCCcore-8.3.0
  • patchelf/0.9-GCCcore-6.4.0
  • re2c/1.1.1-GCCcore-6.4.0
  • tree/1.7.0
  • tmux/3.0-rc5-GCCcore-6.4.0
  • Singularity/2.5.2-GCCcore-6.4.0
  • Singularity/2.6.1-GCCcore-6.4.0
  • Spyder/5.0.0a2-foss-2019b-Python-3.7.4
  • util-linux/2.29-intel-2016b
  • VTune/2019.1
  • wheel/0.30.0-intel-2018a-Python-3.6.3
  • wheel/0.31.1-foss-2017b-Python-3.6.3
  • XZ/5.2.2-gimpi-6.2016
  • XZ/5.2.2-intel-2016b

/cm/shared/uniol/modules/vis

  • at-spi2-core/2.34.0-GCCcore-8.3.0
  • at-spi2-atk/2.34.1-GCCcore-8.3.0
  • ATK/2.24.0-intel-2016b
  • ATK/2.34.1-GCCcore-8.3.0
  • bwidget/1.9.14-GCCcore-8.3.0
  • cairo/1.14.8-GCCcore-6.4.0
  • cairo/1.16.0-GCCcore-6.4.0
  • cairo/1.16.0-GCCcore-8.3.0
  • cairo/1.17.2-GCCcore-8.3.0-snapshot
  • cairomm/1.10.0-GCC-6.4.0-2.28
  • cairomm/1.12.2-GCCcore-8.3.0
  • cairomm/1.15.5-GCCcore-8.3.0
  • FFmpeg/3.1.3-intel-2016b
  • FFmpeg/4.2.1-GCCcore-8.3.0
  • fiji/2.1.2
  • fontconfig/2.12.1-gimpi-6.2016
  • fontconfig/2.13.1-GCCcore-8.3.0
  • fontconfig/2.13.92-GCCcore-8.3.0
  • freetype/2.7.1
  • freetype/2.6.5-gimpi-6.2016
  • freetype/2.8.1-GCCcore-6.4.0
  • freetype/2.9.1-GCCcore-6.4.0
  • gettext/0.18.2-goolf-5.2.01
  • gettext/0.19.8-gimpi-6.2016
  • Gdk-Pixbuf/2.38.2-GCCcore-8.3.0
  • GL2PS/1.4.0-foss-2017b
  • GL2PS/1.4.0-GCCcore-6.4.0
  • GL2PS/1.4.0-GCCcore-8.3.0
  • GL2PS/1.4.2-GCCcore-8.3.0
  • Glade/3.8.5-intel-2016b-Python-2.7.12
  • GLib/2.49.5
  • GLib/2.52.0-intel-2016b
  • GLib/2.54.2-GCCcore-6.4.0
  • GLib/2.60.1-GCCcore-6.4.0
  • GraphicsMagick/1.3.25-intel-2016b
  • GTK+/2.24.3-intel-2016b
  • GTK+/3.24.13-GCCcore-8.3.0
  • gv/3.7.4
  • ImageMagic/7.0.8-46-GCCcore-6.4.0
  • ImageMagic/7.0.9-5-GCCcore-8.3.0
  • inputproto/2.3-goolf-5.2.01
  • kbproto/1.0.6-goolf-5.2.01
  • libGLU/9.0.1-GCCcore-8.3.0
  • libGLU/9.0.1-GCCcore-8.3.0-Mesa-20.0.2
  • matplotlib/2.1.2-intel-2018a-Python-2.7.14
  • matplotlib/2.1.2-intel-2018a-Python-3.6.3
  • matplotlib/2.2.4-foss-2017b-Python-2.7.14
  • matplotlib/3.0.3-intel-2018a-Python-3.6.3
  • matplotlib/3.0.3-foss-2017b-Python-3.6.3
  • matplotlib/3.1.1-foss-2019b-Python-3.7.4
  • matplotlib/3.3.3-fosscuda-2019b-Python-3.7.4
  • Mesa/17.2.5-foss-2017b
  • Mesa/17.2.5-GCCcore-6.4.0
  • Mesa/17.3.6-intel-2018a
  • Mesa/18.1.1-GCCcore-6.4.0
  • Mesa/19.0.1-GCCcore-6.4.0
  • Mesa/19.1.4-GCCcore-6.4.0
  • Mesa/20.0.2-GCCcore-8.3.0
  • NiBabel/2.2.1-intel-2018a-Python-3.6.3
  • NiBabel/3.2.0-foss-2019b-Python-3.7.4
  • Nilearn/0.7.1-foss-2019b-Python-3.7.4
  • OpenCV/3.1.0-intel-2016b
  • OpenCV/3.3.0-foss-2017b-Python-3.6.3
  • OpenCV/4.2.0-fosscuda-2019b-Python-3.7.4
  • OpenCV/4.4.0-fosscuda-2019b-Python-3.7.4
  • p4vasp/0.3.29-intel-2016b-Python-2.7.12
  • ParaView/5.1.2-goolf-5.2.01-mpi
  • ParaView/5.1.2-intel-2016b-mpi (D)
  • PyQt5/5.15.1-GCCcore-8.3.0
  • scikit-image/0.17.1-fosscuda-2019b-Python-3.7.4
  • scikit-image/0.13.0-intel-2016b-Python-2.7.12
  • scikit-image/0.14.0-intel-2018a-Python-2.7.14
  • scikit-image/0.14.0-intel-2018a-Python-3.6.3
  • Tk/8.6.4-intel-2016b-no-X11
  • Tk/8.6.5-gimpi-6.2016
  • Tk/8.6.8-GCCcore-6.4.0
  • torchvision/0.5.0-fosscuda-2019b-Python-3.7.4-PyTorch-1.4.0
  • torchvision/0.7.0-fosscuda-2019b-Python-3.7.4-PyTorch-1.6.0
  • torchvision/0.8.2-fosscuda-2019b-Python-3.7.4-PyTorch-1.7.0
  • UDUNITS/2.2.20-intel-2016b
  • gettext/0.19.8
  • gnuplot/5.0.5-intel-2016b
  • gnuplot/5.2.2-foss-2017b
  • gnuplot/5.2.6-foss-2017b
  • grace/5.1.25
  • libICE/1.0.8-goolf-5.2.01
  • libSM/1.2.1-goolf-5.2.01
  • libX11/1.6.1-goolf-5.2.01
  • libX11/1.6.3-intel-2016b
  • libXaw/1.0.12-goolf-5.2.01
  • libXpm/3.5.11-goolf-5.2.01
  • libXt/1.1.4-goolf-5.2.01
  • LittleCMS/2.9-GCCcore-6.4.0
  • motif/2.3.6
  • ncview/2.1.7-intel-2016b
  • pixman/0.38.4-GCCcore-8.3.0
  • Pillow-SIMD/6.0.x.post0-GCCcore-8.3.0
  • PyCairo/1.10.0-intel-2016b-Python-2.7.12
  • PyCairo/1.18.2-GCCcore-8.3.0
  • PyCairo/1.19.1-GCCcore-8.3.0-Python-3.7.4
  • PyGObject/2.28.6-intel-2016b-Python-2.7.12
  • PyGTK/2.24.0-intel-2016b-Python-2.7.12
  • PyOpenGL/3.1.1a1-intel-2016b
  • Togl/2.0-GCCcore-8.3.0
  • VTK/8.1.0-intel-2018a-Python-2.7.14
  • VTK/8.1.1-foss-2017b-Python-2.7.14
  • VTK/8.2.0-foss-2019b-Python-3.7.4
  • VTK/9.0.1-fosscuda-2019b-Python-3.7.4
  • VTK/9.0.1-fosscuda-2019b_master (more recent than 9.0.1 & bug-fixed)
  • X11/20160819-goolf-5.2.01
  • X11/20171023-GCCcore-6.4.0
  • X11/20180604-GCCcore-6.4.0
  • X11/20190311-GCCcore-6.4.0
  • X11/20200222-GCCcore-8.3.0
  • X11/20210518-GCCcore-8.3.0
  • X11/all
  • XCrySDen/1.6.2-intel-2019b

The list above is based on the information gathered by the command 

module avail

If you want to create a list of every available software on the cluster, on your own, you can do this by simply using the command: 

module spider

The available software will be listed in the format: name, version

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