Difference between revisions of "Installed Application Software and Libraries"

Revision as of 08:15, 4 September 2019

Introduction

This page was created to give you an overview of the installed software on the cluster (name/version). The list will be updated at least once per week.

If you find a program in this list, but cant find it on the cluster (for example when looking at the output of the command module avail) it has most likely been hidden. Its also possible that a module isnt listed here because it is hidden. You can find every hidden module here: /cm/shared/uniol/modules/.hidden. If you want to access a hidden module, you have to add a "." in front of the version number, e.g.:

[abcd1234@hpcl001 ~]$ module load PCRE/8.39-intel-2016b
Lmod has detected the following error:  The following module(s) are unknown: "PCRE/8.39-intel-2016b"

Please check the spelling or version number. Also try "module spider ..."

[abcd1234@hpcl001 ~]$ module load PCRE/.8.39-intel-2016b
[abcd1234@hpcl001 ~]$ ml 

Currently Loaded Modules:
 1) hpc-uniol-env   3) icc/2016.3.210   5) binutils/.2.26-GCCcore-5.4.0   7) impi/5.1.3.210   9) imkl/11.3.3.210  11) PCRE/.8.39-intel-2016b
 2) slurm/current   4) GCCcore/.5.4.0   6) ifort/2016.3.210               8) iimpi/2016b     10) intel/2016b

Latest installed programs and version updates

To keep you up to date, all newly installed programs and version updates of the last two to three months (ca.) are listed in this section. Every new program will be installed in the new environment hpc-env/6.4 from now on.

Software	Version	Toolchain	Date of Installation
MultiQC	1.7	intel/2018a	27/08/2019
Stacks	2.41	foss/2017b	27/08/2019
FDTD Solutions / Lumerical	/2019b-r3	GCCcore/6.4.0	19/08/2019
BBMap	38.61b	foss/2017b	14/08/2019
lemon	1.2.1	GCCcore/6.4.0	30/07/2019
RStan	2.19.2	intel/2018a	26/07/2019
Mindboggle	1.2.4	foss/2017b	25/07/2019
Anaconda	5.3.0	dummy	22/07/2019
RepeatModeler	1.0.11	foss/2017b	17/07/2019
RepeatMasker	4.08	foss/2017b	17/07/2019
R	3.6.1	intel/2018a	16/07/2019
HDF5	1.10.5	iimpi/2018a	10/07/2019
QUAST / QUAST-LG	5.0.2	foss/2017b	10/07/2019
Ghostscript	9.27	GCCcore/6.4.0	10/07/2019
OpenFoam	7	gimkl/2018a	10/07/2019
ImageMagic	7.0.8-46	GCCcore/6.4.0	10/07/2019
SQLite	3.28.0	GCCcore/6.4.0	10/07/2019
MariaDB	10.3.10	foss/2017b	21/06/2019
mysqlclient	1.4.2	foss/2017b	21/06/2019
REPET	2.5	foss/2017b	20/06/2019
RECON	1.08	foss/2017b	19/06/2019
HMMER	3.2.1	foss/2017b	19/06/2019
gnuplot	5.2.6	foss/2017b	04/06/2019
canu	1.8	foss/2017b	04/06/2019

Installed Software

/cm/local/modulefiles

cluster-tools/7.3
cmd
dot
freeipmi/1.5.2
gcc/6.1.0
ipmitool/1.8.17
module-git
module-info
openldap
shared

/cm/shared/uniol/modules/core

hpc-uniol-env (L)
slurm/current (L)

/cm/shared/uniol/modules/bio

AUGUSTUS/3.2.3-intel-2016b-Python-2.7.12
AUGUSTUS/3.2.3-intel-2018a-Python-2.7.14
AUGUSTUS/3.3-intel-2018a
AUGUSTUS/3.3.2-intel-2018a
bam_to_mate_hist/2018.09-intel-2018a-Python-2.7.14
bam_to_mate_hist/2018.11-intel-2018a-Python-2.7.14
BayeScan/2.1-intel-2018a

bcl2fastq2/2.18.0.12
bcl2fastq2/2.19.0
BEDTools/2.26.0
BLAST/2.2.26
BLAST/2.6.0 (D)
BLAST+/2.7.1-foss-2017b-Python-2.7.14
BLAST+/2.7.1-intel-2018a
BLAT/3.5
BamTools/2.4.0
BamTools/2.4.1-intel-2018a
BamTools/2.5.1-intel-2018a
BBMap/38.61b-foss-2017b
BCFtools/1.3.1
BCFtools/1.6
Beast/2.4.5
BioPerl/1.7.0
BioPerl/1.7.2-foss-2017b-Perl-5.26.0
Biopython/1.68
Biopython/1.71-intel-2018a-Python-3.7.0
Biopython/1.71-intel-2018a-Python-2.7.14
Bowtie/1.1.2
Bowtie/1.2.2-intel-2018a
Bowtie2/2.2.9
Bowtie2/2.3.2-intel-2017a
Bowtie2/2.3.4.1-intel-2018a
Bowtie2/2.3.4.3-foss-2017b
Bowtie2/2.3.5.1-GCC-6.4.0-2.28
BRAKER2/2.1.2
bwa.kit/0.7.12
bwa.kit/0.7.17
canu/canu/1.7-intel-2016b
canu/canu/1.8-foss-2017b-Perl-5.28.0
CD-HIT/4.6.4
cutadapt/1.9.1
Exonerate/2.4.0-foss-2017b
Exonerate/2.4.0-intel-2018a
FASTX-Toolkit/0.0.14
FastQC/0.11.5
FreeSurfer/6.0.1
FSL/6.0.0-foss-2017b
GATK/3.7-Java-8.112
GeneMark-EX/4.33
genometools/1.5.10-foss-2017b
GffCompare/0.10.1-foss-2017b
GffCompare/0.10.6-foss-2017b
gffread/0.9.12-foss-2017b
GROMACS/5.1.4-intel-2016b-mt
HTSlib/1.8
HISAT2//2.1.0-intel-2018a
HMMER/3.2.1-foss-2017b
IGV/2.3.80
IGVTools/2.3.75
KNIME
Lighter/1.0
lpsolve/5.5.2.5-intel-2016b
lpsolve/5.5.2.5-intel-2018a
Lumpy/0.1
MaSuRCA/3.2.4-GCCcore-6.4.0
MaSuRCA/3.3.0-foss-2017b-Perl-5.26.0
MCL/14.137-foss-2017b
Mindboggle/1.2.4-foss-2017b-Python-3.6.3
MrBayes/3.2.6-foss-2017b
MultiQC/1.7-intel-2018a-Python-3.6.3
NextGenMap/0.5.2
NSEG/1.0-GCCcore-6.4.0
Picard/2.9.0
Pychopper/0.4.0-intel-2018a-Python-3.7.0
QUAST / QUAST-LG
RECON/1.08-foss-2017b
RepeatMasker/4.0.7-foss-2017b
RepeatMasker/4.0.8-foss-2017b-Perl-5.28.0-HMMER
RepeatModeler/1.0.11-foss-2017b
RepeatScout/1.0.5-GCCcore-6.4.0
REPET/2.5-foss-2017b-Python-2.7.14
RSEM/1.3.1-intel-2018a
Salmon/0.11.2-intel-2018a-Python-2.7.14
Salmon/0.11.3-foss-2017b-Python-2.7.14
SAMtools/1.3.1
SAMtools/1.7
SAMtools/1.8
SNAP/1.0beta.23-foss-2017b
SNAP-HMM/2013-11-29-GCCcore-6.4.0
SOAPdenovo2/r240
Stacks/1.42
Stacks/2.1-foss-2016b
Stacks/2.1-intel-2018a
Stacks/2.4-intel-2018a
Stacks/2.4.1-foss/2017b
STAR/2.5.4b-intel-2016b
STAR/2.6.1 d-foss-2017b
StringTie/1.3.5-GCCcore-6.4.0
tabix/0.2.6
TopHat/2.1.1
Trimmomatic/0.36
Trinity/2.2.0
Trinity/2.4.0
Trinity/2.6.6
Trinity/2.8.4
Unet/2019.02-intel-2018a-Python-3.6.3
VCFTools/0.1.14
ViennaRNA/2.3.1

/cm/shared/uniol/modules/cfd

ESMF/7.0.0
ESMF/7.1.0r
GMT/5.3.1
OpenFOAM/1.7.1
OpenFOAM/2.1.1
OpenFOAM/2.3.1
OpenFOAM/2.4.0
OpenFOAM/3.0.1
OpenFOAM/4.0
OpenFOAM/4.1-gcc
OpenFOAM/4.1-se
OpenFOAM/4.1 (D)
OpenFOAM-Extend/3.2
OpenFOAM-Extend/4.0-gimkl-2018a
OpenFOAM/2.4.0-gimkl-201
OpenFOAM/2.4.0-gimkl-2018a
OpenFOAM/5.0-gimkl-2018a
OpenFOAM/6-gimkl-2018a
OpenFOAM/7-gimkl-2018a
OpenFOAM/-Plus/1906-gimkl-2018a
PALMDependencies/all
ThetaDependencies/all
WPS/3.6.1
WPS/3.7.1
WPS/3.8.0
WPS/3.8.1
WPS/3.9 (D)
WPSGeodata/3.8 (D)
WPS/1.2.1-intel-2018a-solar
WPS/4.0-intel-2018a-dmpar
WPS/4.0.1-intel-2018a-dmpar
WPS/4.0.2-intel-2018a-dmpar
WRF/3.6.1
WRF/3.7.1
WRF/3.8.0
WRF/3.8.1
WRF/3.9 (D)
WRF/1.2.4-intel-2018a-solar
WRF/3.6.1-intel-2018a
WRF/4.0-intel-2018a
WRF/4.0.1-intel-2018a
WRF/4.0.2-intel-2018a
WRFGeodata/all
WRFGeodata/3.8
WRFGeodata/4.0

/cm/shared/uniol/modules/chem

CP2K/3.0
CP2K/5.1
gaussian/g09.b01
gaussian/g09.d01
gaussian/g16.a03
NAMD/2.12
NBO 2016/6.0
ORCA/3.0.3
ORCA/4.0.0
ORCA/4.0.1.2
pDynamo/1.9.0
PLUMED/2.2.3

/cm/shared/uniol/modules/compiler

CUDA-Toolkit/8.0.44
CUDA-Toolkit/recent
GCC/4.9.4-2.25
GCC/5.4.0-2.26
GCC/6.2.0-2.27 (D)
Go/1.11.5
LLVM/3.8.1-goolf-5.2.01
LLVM/3.8.1-intel-2016b
LLVM/3.8.1-gimpi-6.2016
LLVM/3.9.0-intel-2016b
LLVM/5.0.0-foss-2017b
LLVM/5.0.0-GCCcore-6.4.0
LLVM/6.0.0-GCCcore-6.4.0
LLVM/7.0.0-GCCcore-6.4.0 (D)
NAG_Fortran/5.2
PGI/12.10
PGI/15.10
PGI/16.10 (D)
icc/2016.3.210
ifort/2016.3.210

/cm/shared/uniol/modules/data

ANTs/2.2.0-foss-2017b-Python-2.7.14
CDO/1.7.2-intel-2016b
HDF/4.2.11-intel-2016b
HDF/4.2.12-gimkl-7.2017.3
HDF/4.2.12-goolf-7.2.11
HDF5/1.8.17-intel-2016b
HDF5/1.10.1-foss-2017b
HDF5/1.10.1-intel-2018a
HDF5/1.10.2-gimkl-2018a
HDF5/1.10.2-intel-2018a
HDF5/1.10.5-intel-2018a
MariaDB/10.3.10-foss-2017b
merra2wrf/2.0
NCL/6.3.0-intel-2016b
g2clib/1.4.0-intel-2016b
g2lib/1.4.0-intel-2016b
grib_api/1.16.0-intel-2016b
netCDF/4.4.1-intel-2016b
netCDF/4.4.1-intel-2016b-with-HDF4
netCDF-Fortran/4.4.4-intel-2016b
netCDF-Fortran/4.4.4-intel-2016b-with-HDF4
netCDF/4.6.1-gimkl-2018a
netCDF/4.6.1-intel-2018a
netCDF-Fortran/4.4.4-intel-2018a
netCDF-C++/4.3.0-intel-2018a
PyTables/3.5.1-foss-2017b-Python-2.7.14
PyTables/3.5.1-foss-2017b-Python-3.6.3
ROOT/v5.34.36
ROOT/v6.08.02
RStan/2.19.2-intel-2018a-R-3.6.1

/cm/shared/uniol/modules/devel

ALE/0.6.0-GCCcore-6.4.0
Autoconf/2.69-gimpi-6.2016
Autoconf/2.69-gimpi-6.2016
Automake/1.16.1-GCCcore-6.4.0
Autotools/20150215
Autotools/20150215-gimpi-6.2016
Autotools/20170619-GCCcore-6.4.0
Autotools/20180311-GCCcore-6.4.0
ant/1.10.1-Java-1.8.0_172
Boost/1.61.0-gimpi-6.2016
Boost/1.61.0-goolf-5.2.01
Boost/1.61.0-intel-2016b
Boost/1.64.0-intel-2017a
Boost/1.65.1-foss-2017b-Python-3.6.3
Boost/1.66.0-intel-2018a
Boost/1.67.0-foss-2017b-Python-2.7.14
catkin/0.7.14-foss-2017b-Python-2.7.14
catkin-dep/1.0-foss-2017b-Python-2.7.14
CMake/2.8.12
CMake/3.6.2 (D)
CMake/3.5.2-gimpi-6.2016
CMake/3.6.1-gimpi-6.2016
CMake/3.9.1-GCCcore-6.4.0
CMake/3.9.5-GCCcore-6.4.0
CUDA-Profiler/8.0.44
CUDA-Visual-Profiler/8.0.44
Cube/4.3.4
GObject-Introspection/1.52.0-intel-2016b
gflags/2.2.2-GCCcore-6.4.0
glog/0.4.0-GCCcore-6.4.0
gtest/1.8.0-GCCcore-6.4.0
intltool/0.51.0-foss-2017b-Perl-5.26.0
intltool/0.51.0-GCCcore-6.4.0-Perl-5.26.0
intltool/0.51.0-intel-2018a-Perl-5.26.0
intltool/0.51.0-intel-2018a-Perl-5.28.0
intltool/0.51.0-intel-2018a
libXmu/1.1.2-goolf-5.2.01
LZO/2.10-foss-2017b
M4/1.4.17
M4/1.4.17-gimpi-6.2016
Mako/1.0.4-gimpi-6.2016-Python-2.7.12
Mako/1.0.7-foss-2017b-Python-3.6.3
Mako/1.0.7-intel-2018a-Python-2.7.14
Mako/1.0.8-intel-2018a-Python-2.7.14
Mako/1.0.8-intel-2018a-Python-3.7.0
ncurses/6.0
ncurses/6.0-gimpi-6.2016
Nvidia-Tesla-GDK/352.79
OTF2/2.0
PCRE/8.40
pkg-config/0.29.1-gimpi-6.2016
Qt/4.8.7-goolf-5.2.01
Qt/4.8.7-intel-2016b
Qt/5.8.0-GCCcore-6.4.0
Qt/5.12.1-foss-2017b
ROS/1.14.4-foss-2017b-Python-2.7.14
SQLite/3.9.2-intel-2016b
SQLite/3.13.0-goolf-5.2.01
SQLite/3.13.0-intel-2016b
SQLite/3.19.3
SQLite/3.20.1-GCCcore-6.4.0
SQLite/3.23.0-intel-2018a
SQLite/3.28.0-GCCcore-6.4.0
Spark/2.4.0-intel-2018a-Hadoop-2.7
SWIG/3.0.8-intel-2016b-Python-2.7.12
SWIG/3.0.12-Python-3.6.1
Scalasca/2.3
Valgrind/3.12.0
xbitmaps/1.1.1
xcb-proto/1.7-goolf-5.2.01-Python-2.7.3
xextproto/7.2.1-goolf-5.2.01
xproto/7.0.23-goolf-5.2.01
xtrans/1.2-goolf-5.2.01
xorg-macros/1.19.0

/cm/shared/uniol/modules/lang

Anaconda3/4.3.0
Anaconda3/ 5.1.0
Anaconda3/ 5.3.0
Bison/3.0.4
Bison/3.0.4-gimpi-6.2016
Gurobi/7.0.2
flex/2.6.0-gimpi-6.2016
flex/2.6.4-GCCcore-6.4.0
Java/8.112
Java/1.8
Java/1.8.0_172
Java/1.8.0_192
Java/11.0.2
Julia/1.0.1-intel-2018a-Perl-5.28.0
nodejs/4.4.7-intel-2016b
Perl/5.20.3
Perl/5.26.0-foss-2017b
Perl/5.26.0-GCCcore-6.4.0
Perl/5.28.0-GCCcore-6.4.0
Python/2.7.3-goolf-5.2.01
Python/2.7.11-intel-2016b
Python/2.7.12
Python/2.7.14-intel-2018a
Python/2.7.14-foss-2017b
Python/3.5.2 (D)
Python/3.6.1-goolf-5.2.01
Python/3.6.3-foss-2017b
Python3.6.3-intel-2018a
Python/3.7.0-foss-2017b
Python/3.7.0-intel-2018a
R/3.3.1
R/3.4.3
R/3.5.2
R/3.6.1
ScientificPython/2.9.4-Python-2.7.12 (D)
TCL/8.6.4-intel-2016b
TCL/8.6.5
TCL/Tcl/8.6.7-GCCcore-6.4.0
TCL/Tcl/8.6.8-GCCcore-6.4.0
Tkinter/2.7.14-foss-2017b-Python-2.7.14
Tkinter/2.7.14-intel-2018a-Python-2.7.14
Tkinter/3.6.3-intel-2018a-Python-3.6.3
Yasm/1.3.0

/cm/shared/uniol/modules/lib

Blosc/1.14.4-GCCcore-6.4.0
CFITSIO/3.410
CUDA-Blas/8.0.44
CUDA-FFT/8.0.44
GlobalArrays/5.4b-intel-2016b
ICU/61.1-GCCcore-6.4.0
ICU/64.2-GCCcore-6.4.0
jemalloc/5.1.0-GCCcore-6.4.0
lemon/1.2.1-GCCcore-6.4.0
libdrm/2.4.70-gimpi-6.2016
libffi/3.2.1-gimpi-6.2016
libglade/2.6.4-intel-2016b
libharu/2.3.0-intel-2016b
libjpeg-turbo/1.5.2-GCCcore-6.4.0
libjpeg-turbo/2.0.2-GCCcore-6.4.0
libtool/2.4.6
libtool/2.4.6-gimpi-6.2016
libpng/1.6.24
libpng/1.6.24-gimpi-6.2016
libreadline/6.3-gimpi-6.2016
libreadline/6.2-goolf-5.2.01
libreadline/7.0-GCCcore-6.4.0
libreadline/8.0-GCCcore-6.4.0
libunwind/1.2.1-GCCcore-6.4.0
libxcb/1.8-goolf-5.2.01-Python-2.7.3
libXft/2.3.2-intel-2016b
libxml2/2.9.4
libxml2/2.9.4-gimpi-6.2016
libXpm/3.5.11-goolf-5.2.01
libXpm/3.5.11-intel-2016b
libyaml/0.1.7-GCCcore-6.4.0
libyaml/0.2.2-GCCcore-6.4.0
mysqlclient/1.4.2-foss-2017b-Python-2.7.14
nettle/3.2-gimpi-6.2016
nettle/3.3-GCCcore-6.4.0
nettle/3.4.1-GCCcore-6.4.0
path.py/8.2.1-intel-2016b-Python-3.5.2
pyYAML//3.12-intel-2018a-Python-3.6.3
PyYAML/3.13-foss-2017b-Python-3.6.3
PyYAML/5.1-foss-2017b-Python-2.7.14
SDL2/2.0.8-GCCcore-6.4.0
SDL2/2.0.8-intel-2018a
SIONlib/1.6.1
testpath/0.3-intel-2016b-Python-3.5.2
Xerces-C++/3.1.3
xforms/1.2.4
zlib/1.2.7-goolf-5.2.01
zlib/1.2.8
zlib/1.2.8-gimpi-6.2016
zlib/1.2.11
zlib/1.2.11-GCCcore-6.4.0
zoltan/3.83

/cm/shared/uniol/modules/math

Eigen/3.2.9-gimpi-6.2016
bgc/1.03-intel-2018a
GMP/6.1.0-intel-2016b
GMP/6.1.1
METIS/5.1.0-gimpi-6.2016 (D)
NEURON/7.5-intel-2016b
NEURON/7.6.2-intel-2018a
numexpr/2.6.5-foss-2017b-Python-3.6.3
MPFR/3.1.4
SCOTCH/6.0.4-gimpi-6.2016 (D)
Theano/1.0.1-foss-2017b-Python-3.6.3

/cm/shared/uniol/modules/mpi

OpenMPI/1.10.4-GCC-4.9.4
OpenMPI/2.0.1-GCC-5.4.0
OpenMPI/2.0.1-GCC-6.2.0
OpenMPI/2.0.2-GCC-5.4.0-2.26 (D)
impi/5.1.3.210

/cm/shared/uniol/modules/numlib

ATLAS/3.10.2
Armadillo/7.500.1
CGAL/4.8.1-gimpi-6.2016
CLHEP/2.1.3.1
CLHEP/2.2.0.4
CLHEP/2.3.1.1
CLHEP/2.3.4.3
cuDNN/5.1-CUDA-8.0.44
cvx/2.1
Eigen/3.2.9
Eigen/3.2.9-gimpi-6.2016
FFTW/3.3.5-gompi-5.2.01
FIAT/1.6.0-intel-2016b-Python-2.7.12
GMP/6.1.1 (D)
GSL/2.1-intel-2016b
GSL/2.3-goolf-6.2.01
GSL/2.3-intel-2016b
GSL/2.4-GCCcore-6.4.0
GSL/2.4-goolf-7.2.11
Hypre/2.11.1
imkl/11.3.3.210
leda/6.3
LinBox/1.4.0
maple/18
maple/2016 (D)
MATLAB/2016b
MATLAB/2017b
MATLAB/2018b
MPFR/3.1.4
NLopt/2.4.2-foss-2017b
NLopt/2.4.2-intel-2018a
NLopt/2.6.1-GCCcore-6.4.0
NTL/9.8.1
Octave/4.0.3
[[BLAS and LAPACK 2016 | OpenBLAS]/0.2.19
[[BLAS and LAPACK 2016 | OpenBLAS]/0.2.20-GCC-6.4.0-2.28
Qhull/2015.2
ScaLAPACK/2.0.2
SuiteSparse/4.5.3
SuiteSparse/4.5.3-intel-2018a-METIS-5.1.0
SuiteSparse/5.2.0-intel-2016b-METIS-5.1.0
SuiteSparse/5.2.0-intel-2018a-METIS-5.1.0
stata/13

/cm/shared/uniol/modules/phys

EGSnrc/2017
EGSnrc/2018
FDTD Solutions/8.20.1634
FDTD Solutions/8.20.1731
FDTD Solutions/8.21.1933
fluka/2011.2c
Geant4/9.6.p04
Geant4/10.01.p01
Geant4/10.01.p03
Geant4/10.02.p01
Geant4/10.03.p01
Geant4/10.4.1-intel-2018a-noMT
Geant4/10.4.1-intel-2018a
Geant4/10.5.0-foss-2017b-noMT
- g4py/10.05
Lumerical/2019b-r3
PVMOS/0.48

/cm/shared/uniol/modules/toolchain

foss/2016b
gimpi/6.2016
gompi/4.1.10
gompi/5.2.01
gompi/6.2.01 (D)
goolf/4.1.10
goolf/5.2.01
goolf/6.2.01
iimpi/2013b
iimpi/2016b (D)
intel/2013b
intel/2016b (D)

/cm/shared/uniol/modules/tools

ansys/18.0
bzip2/1.0.6-gimpi-6.2016
configurable-http-proxy/1.3.0-intel-2016b-nodejs-4.4.7
EasyBuild/3.0.0
EasyBuild/3.6.1
EasyBuild/3.8.1
EasyBuild/3.9.0
EasyBuild/3.9.2
EasyBuild/3.9.3
expat/2.2.0-gimpi-6.2016
Ghostscript/9.19-intel-2016b
Ghostscript/9.27-GCCcore-6.4.0
NCO/4.6.0-intel-2016b
Meson/0.50.0-intel-2018a-Python-3.7.0
parallel/20160622-GCC-5.4.0-2.26
parallel/20180422-intel-2018a
parallel/20190222-GCCcore-6.4.
tree/1.7.0
Singularity/2.5.2-GCCcore-6.4.0
Singularity/2.6.1-GCCcore-6.4.0
util-linux/2.29-intel-2016b
XZ/5.2.2-gimpi-6.2016
XZ/5.2.2-intel-2016b

/cm/shared/uniol/modules/vis

ATK/2.24.0-intel-2016b
cairo/1.14.8-GCCcore-6.4.0
cairo/1.16.0-GCCcore-6.4.0
cairomm/1.10.0-GCC-6.4.0-2.28
FFmpeg/3.1.3-intel-2016b
fontconfig/2.12.1-gimpi-6.2016
freetype/2.7.1
freetype/2.6.5-gimpi-6.2016
freetype/2.8.1-GCCcore-6.4.0
freetype/2.9.1-GCCcore-6.4.0
gettext/0.18.2-goolf-5.2.01
gettext/0.19.8-gimpi-6.2016
Glade/3.8.5-intel-2016b-Python-2.7.12
GLib/2.49.5
GLib/2.52.0-intel-2016b
GLib/2.54.2-GCCcore-6.4.0
GLib/2.60.1-GCCcore-6.4.0
GraphicsMagick/1.3.25-intel-2016b
GTK+/2.24.3-intel-2016b
gv/3.7.4
ImageMagic/7.0.8-46-GCCcore-6.4.0
inputproto/2.3-goolf-5.2.01
kbproto/1.0.6-goolf-5.2.01
matplotlib/2.1.2-intel-2018a-Python-2.7.14
matplotlib/2.1.2-intel-2018a-Python-3.6.3
matplotlib/2.2.4-foss-2017b-Python-2.7.14
matplotlib/3.0.3-intel-2018a-Python-3.6.3
matplotlib/3.0.3-foss-2017b-Python-3.6.3
Mesa/17.2.5-foss-2017b
Mesa/17.2.5-GCCcore-6.4.0
Mesa/17.3.6-intel-2018a
Mesa/18.1.1-GCCcore-6.4.0
Mesa/19.0.1-GCCcore-6.4.0
Mesa/19.1.4-GCCcore-6.4.0
OpenCV/3.1.0-intel-2016b
p4vasp/0.3.29-intel-2016b-Python-2.7.12
ParaView/5.1.2-goolf-5.2.01-mpi
ParaView/5.1.2-intel-2016b-mpi (D)
Tk/8.6.4-intel-2016b-no-X11
Tk/8.6.5-gimpi-6.2016
Tk/8.6.8-GCCcore-6.4.0
UDUNITS/2.2.20-intel-2016b
gettext/0.19.8
gnuplot/5.0.5-intel-2016b
gnuplot/5.2.2-foss-2017b
gnuplot/5.2.6-foss-2017b
grace/5.1.25
libICE/1.0.8-goolf-5.2.01
libSM/1.2.1-goolf-5.2.01
libX11/1.6.1-goolf-5.2.01
libX11/1.6.3-intel-2016b
libXaw/1.0.12-goolf-5.2.01
libXpm/3.5.11-goolf-5.2.01
libXt/1.1.4-goolf-5.2.01
LittleCMS/2.9-GCCcore-6.4.0
motif/2.3.6
ncview/2.1.7-intel-2016b
PyCairo/1.10.0-intel-2016b-Python-2.7.12
PyGObject/2.28.6-intel-2016b-Python-2.7.12
PyGTK/2.24.0-intel-2016b-Python-2.7.12
PyOpenGL/3.1.1a1-intel-2016b
VTK/8.1.0-intel-2018a-Python-2.7.14
VTK/8.1.1-foss-2017b-Python-2.7.14
X11/20160819-goolf-5.2.01
X11/20171023-GCCcore-6.4.0
X11/20180604-GCCcore-6.4.0
X11/20190311-GCCcore-6.4.0
X11/all

The list above is based on the information gathered by the command

module avail

If you want to create a list of every available software on the cluster, on your own, you can do this by simply using the command:

module spider

The available software will be listed in the format: name, version

@@ Line 350: / Line 350: @@
 *GObject-Introspection/1.52.0-intel-2016b
 *gflags/2.2.2-GCCcore-6.4.0
+*glog/0.4.0-GCCcore-6.4.0
 *gtest/1.8.0-GCCcore-6.4.0
 *intltool/0.51.0-foss-2017b-Perl-5.26.0