Welcome to the HPC User Wiki of the University of Oldenburg

This is the HPC-Wiki of the University of Oldenburg

Basic Information

HPC Facilities	Login	User environment	Compiling and linking	Job Management (Queueing) System	Altix UV 100 system	Examples
Overview FLOW HERO HPC Policies Groups Acknowledging FLOW/HERO User Meetings	From University From Home	Usage of module File System / Quotas Shares under Windows Shares under Linux License servers	Basics GNU Compiler Intel Compiler PGI Compiler Open64 Compiler Altix UV 100	Overview Submitting Job requirements Parallel jobs Interactive jobs Commands Job arrays Environment variables Checking the job status (par. jobs) Obtaining details for finished jobs Documentation On Queues and resource allocation	Compiling Submitting Documentation	Brief Introduction to HPC Computing Matlab examples using MDCS MDCS Basic Example (for R2014b and later) HPC Tutorial 2013 HPC Tutorial 2014 HPC Tutorial 2015

Application Software and Libraries

Compiler and Development Tools	Quantum Chemistry	Computational Fluid Dynamics	Mathematics/Scripting	Visualisation	Libraries
debugging git GNU Compiler Intel Compiler Open64 Compiler PGI Compiler profiling scalasca subversion (svn) valgrind	Gaussian 09 MOLCAS MOLPRO NBO ORCA	Ansys FOAMpro Nektar++ Nek 5000 OpenFOAM PALM STAR-CCM++ THETA WRF/WPS	Configuration MDCS (2014b and later) MATLAB Distributing Computing Server Python R STATA	iso99 NCL ncview paraview	BLAS and LAPACK EGSnrc FLUKA GEANT4 Gurobi HDF5 Intel MPI LEDA NetCDF OpenMPI

Courses and Tutorials

Introduction to HPC Courses	Matlab Tutorials	New OS
HPC Introduction October 6-8, 2014 HPC Introduction October 7-9, 2015	Audio Data Processing Using the MEX Compiler	New OS on FLOW

Contact

HPC Resource	EMail
FLOW and HERO Both (in case of vacation)	Stefan.Harfst@uni-oldenburg.de hpcuniol@uni-oldenburg.de

Note: This Wiki is under construction and a preliminary version! Contributions are welcome. Please ask Stefan Harfst (Stefan.Harfst(at)uni-oldenburg.de) for further informations.

Only for editors: Formatting rules for this Wiki

HPC User Wiki 2016