Welcome to the HPC User Wiki of the University of Oldenburg

This is the HPC-Wiki of the University of Oldenburg

Basic Information

HPC Facilities	Login	User environment	Compiling and linking	Job Management (Queueing) System	Altix UV 100 system	Examples
Overview FLOW HERO HPC Policies Groups Acknowledging FLOW/HERO User Meetings	From University From Home	Usage of module File System / Quotas Shares under Windows Shares under Linux License servers	Basics GNU Compiler Intel Compiler PGI Compiler Open64 Compiler Altix UV 100	Overview Submitting Job requirements Parallel jobs Interactive jobs Commands Job arrays Environment variables Checking the job status (par. jobs) Obtaining details for finished jobs Documentation On Queues and resource allocation	Compiling Submitting Documentation	Brief Introduction to HPC Computing Matlab examples using MDCS MDCS Basic Example (for R2014b and later) HPC Tutorial 2013 HPC Tutorial 2014

Application Software and Libraries

Compiler and Development Tools	Quantum Chemistry	Computational Fluid Dynamics	Mathematics/Scripting	Visualisation	Libraries
GNU Compiler Intel Compiler PGI Compiler Open64 Compiler scalasca subversion (svn) git debugging valgrind profiling	Gaussian 09 MOLCAS MOLPRO	PALM STAR-CCM++ WRF/WPS OpenFOAM FOAMpro Nektar++ Nek 5000	MATLAB Distributing Computing Server Configuration MDCS (2014b and later) R Python STATA	ncview NCL paraview	Intel MPI OpenMPI BLAS and LAPACK HDF5 NetCDF LEDA EGSnrc FLUKA GEANT4

Courses and Tutorials

Introduction to HPC Courses	Matlab Tutorials	New OS
HPC Introduction October 6-8, 2014 HPC Introduction October 7-9, 2015	Audio Data Processing	New OS on FLOW

Contact

HPC Resource	EMail
FLOW HERO Both (in case of vacation)	Stefan.Albensoeder@uni-oldenburg.de Stefan.Harfst@uni-oldenburg.de hpcuniol@uni-oldenburg.de

Note: This Wiki is under construction and a preliminary version! Contributions are welcome. Please ask Stefan Albensoeder (Stefan.Albensoeder(at)forwind.de) for further informations.

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