Difference between revisions of "HPC User Wiki 2016"

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*[[IGV and IGVTools]]
*[[IGV and IGVTools]]
*[[Lighter]]
*[[Lighter]]
*[[Lumpy]]
*[[Lumpy]]Biopython
*[[NextGenMap]]
*[[NextGenMap]]
*[[Picard]]
*[[Picard]]
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** [[GEANT4 2016#GRAS | GRAS]]
** [[GEANT4 2016#GRAS | GRAS]]
** [[GEANT4 2016#GATE | GATE]]
** [[GEANT4 2016#GATE | GATE]]
* [[FDTD_Solutions 2016 | FDTD_Solutions]]
* [[HDF5 2016 | HDF5]]
* [[HDF5 2016 | HDF5]]
* [[LEDA  2016 | LEDA]]
* [[LEDA  2016 | LEDA]]

Revision as of 10:27, 25 July 2018

Documentation for High-Performance Computing at the University Oldenburg

This is the HPC User Wiki for the HPC clusters CARL and EDDY. If you would like to contribute please contact Scientific Computing!

The old wiki for HERO and FLOW is found here.

General Information

HPC Facilities Quickstart Guide User environment Job Management (Queueing) System

Application Software and Libraries

Compiler and Development Tools Quantum Chemistry Biology Computational Fluid Dynamics Mathematics/Scripting Visualisation Libraries

Courses and Tutorials

Below you can find a list of Courses and Tutorials for our HPC clusters. Currently, a short, two hour introduction for the new clusters CARL and EDDY is planned. During the summer semester a lecture "Introduction to HPC" is held (2h/week). If you are interested in attending or would like to request a course please contact Scientific Computing.

Courses and Workshops Lectures Tutorials
  • Introduction to the new HPC Clusters [pdf]
    (23.02.2017, 14-16pm c.t., W02 1-148)
  • Introduction to the new HPC Clusters [pdf]
    (14.03.2017, 14-16pm c.t., W02 1-148)
  • Introduction for EDDY users for migrating from FLOW [pdf]
    (01.03.2017 and 02.03.2017, 10-12am c.t.)
  • OpenACC Workshop
    (28./29.3.2017, 10am-6pm, W01 0-008)
  • Introduction to HPC
    (18./20.09.2017, 9am-5pm, W01 0-008)
  • Introduction to HPC
    (19./21.03.2018, 10am-5pm, W01 0-008)

Contact

In case you need HPC support you can use the contacts listed below. The servicedesk of IT services can be contacted for all questions regarding HPC, and are recommended in particular when someone is absent (e.g. due to a vacation).

HPC Resource Name EMail
CARL and EDDY General HPC Support
and Servicedesk
servicedesk@uni-oldenburg.de
CARL Stefan Harfst
Julius Brunken
stefan.harfst@uni-oldenburg.de
julius.brunken@uni-oldenburg.de
EDDY Wilke Trei wilke.trei@forwind.de


HPC Support Internal