Listentest

Application Software and Libraries

Compiler and Development Tools	Quantum Chemistry	Biology		Mathematics/Scripting	Visualisation
GNU Compiler Intel Compiler MPI Libraries PGI Compiler OpenACC ROS Toolchains	Gaussian GaussView ORCA CP2K NBO pDynamo GROMACS NAMD PLUMED CRYSTAL	AUGUSTUS bam_to_mate_hist BCFtools Beast BEDTools bgc BLAST BLAT BamTools BioPerl Biopython Bowtie 1/Bowtie 2 BRAKER2 Burrows-Wheeler Aligner CD-HIT cutadapt Exonerate FASTX-Toolkit FastQC GeneMark-EX IGV and IGVTools jcvi	Lighter lpsolve Lumpy NextGenMap Picard RSEM Salmon SAMtools Sickle SNAP SNAP-HMM SOAPdenovo2 Stacks Trinity VCFTools ViennaRNA TopHat GATK Trimmomatic	Julia MATLAB Advanced Examples MDCS Basic Examples MDCS Configuration MDCS CVX MDCS with GPUs IQMtools Python Anaconda R STATA Gurobi Maple	Mesa NCL ncview paraview

Libraries	Physics	Machine Learning	Computational Fluid Dynamics	Languages
BLAS and LAPACK	EGSnrc FLUKA GEANT4 GRAS GATE FDTD Solutions HDF5 LEDA NetCDF	Caffe	ESMF GMT PALM OpenFOAM THETA WRF/WPS	Anaconda Bison Bison Gurobi flex Java Julia nodejs Perl Python R ScientificPython Tcl Yasm