SNAP-HMM 2016

From HPC users
Revision as of 11:48, 31 July 2018 by Schwietzer (talk | contribs) (Created page with "== Introduction == SNAP is a general purpose gene finding program suitable for both eukaryotic and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid Pars...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigationJump to search

Introduction

SNAP is a general purpose gene finding program suitable for both eukaryotic and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid Parser.


Installed version

Although the program is actually only called SNAP, it was installed with the suffix '-HMM' to distinguish it from the other SNAP version. You can find both version by typing in

module spider snap

The correct and only SNAP-HMM version is SNAP-HMM/2013-11-29-GCCcore-6.4.0 and can be loaded within the hpc-env/6.4 environment.

module load hpc-env/6.4
module load SNAP-HMM/2013-11-29-GCCcore-6.4.0

Documentation