Difference between revisions of "Pychopper 2016"

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(Created page with "== Introduction == == Installed version == The currently installed version is available on environment ''hpc-env/6.4'': Pychopper/''0.4.0''-intel-2018a-Python-3.7.0 == Us...")
 
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The currently installed version is available on environment ''hpc-env/6.4'':
The currently installed version is available on environment ''hpc-env/6.4'':
  Pychopper/''0.4.0''-intel-2018a-Python-3.7.0
  Pychopper/'''0.4.0'''-intel-2018a-Python-3.7.0


== Using Pychopper ==
== Using Pychopper ==
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Always remember: this command is case sensitive!
Always remember: this command is case sensitive!


To get an overview about the basic commands type as follows (after loading the modules):
cdna_classifier.py -h


== Documentation ==
== Documentation ==


The full documentation can be found [ here].
The repository and the corresponding README file can be found [https://github.com/nanoporetech/pychopper here].

Revision as of 14:27, 4 February 2019

Introduction

Installed version

The currently installed version is available on environment hpc-env/6.4:

Pychopper/0.4.0-intel-2018a-Python-3.7.0

Using Pychopper

If you want to find out more about Pychopper on the HPC Cluster, you can use the command

module spider Pychopper

This will show you basic informations e.g. a short description and the currently installed version.

To load the desired version of the module, use the command, e.g.

module load hpc-env 6.4
module load Pychopper

Always remember: this command is case sensitive!

To get an overview about the basic commands type as follows (after loading the modules):

cdna_classifier.py -h

Documentation

The repository and the corresponding README file can be found here.