MaSuRCA 2016
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Introduction
MaSuRCA is whole genome assembly software. It combines the efficiency of the de Bruijn graph and Overlap-Layout-Consensus (OLC) approaches. MaSuRCA can assemble data sets containing only short reads from Illumina sequencing or a mixture of short reads and long reads (Sanger, 454, Pacbio and Nanopore).
Installed version
The currently installed version is available on environment hpc-env/6.4:
MaSuRCA/3.2.4-GCCcore-6.4.0 MaSuRCA/3.3.0-foss-2017b-Perl-5.26.0
Using MaSuRCA
If you want to find out more about MaSuRCA on the HPC Cluster, you can use the command
module spider MaSuRCA
This will show you basic informations e.g. a short description and the currently installed version.
To load the desired version of the module, use the command, e.g.
module load hpc-env 6.4 module load MaSuRCA
Always remember: this command is case sensitive!
Documentation
The full documentation can be found [ here].
