Difference between revisions of "SNAP-HMM 2016"
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module load hpc-env/6.4 | module load hpc-env/6.4 | ||
module load SNAP-HMM/2013-11-29-GCCcore-6.4.0 | module load SNAP-HMM/2013-11-29-GCCcore-6.4.0 | ||
== Using SNAP-HMM == | |||
== Documentation == | == Documentation == | ||
For further information read the [https://github.com/KorfLab/SNAP/blob/master/README.md readme file] or visit the [http://korflab.ucdavis.edu/ developer's website]. | For further information read the [https://github.com/KorfLab/SNAP/blob/master/README.md readme file] or visit the [http://korflab.ucdavis.edu/ developer's website]. | ||
Revision as of 12:30, 31 July 2018
Introduction
SNAP is a general purpose gene finding program suitable for both eukaryotic and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid Parser.
Installed version
Although the program is actually only called SNAP, it was installed with the suffix '-HMM' to distinguish it from the other SNAP version. You can find both version by typing in
module spider snap
The correct and only SNAP-HMM version is SNAP-HMM/2013-11-29-GCCcore-6.4.0 and can be loaded within the hpc-env/6.4 environment.
module load hpc-env/6.4 module load SNAP-HMM/2013-11-29-GCCcore-6.4.0
Using SNAP-HMM
Documentation
For further information read the readme file or visit the developer's website.
