Difference between revisions of "STAR 2016"
From HPC users
Jump to navigationJump to search
Schwietzer (talk | contribs) m (→Documentation) |
Schwietzer (talk | contribs) |
||
| Line 4: | Line 4: | ||
== Installed version == | == Installed version == | ||
These versions are installed and and currently available ... | |||
... on envirnoment ''hpc-uniol-env'': | |||
'''STAR/2.5.4b-intel-2016b''' | |||
... on environment ''hpc-env/6.4'': | |||
'''STAR/2.6.1d-foss-2017b''' | '''STAR/2.6.1d-foss-2017b''' | ||
Revision as of 13:30, 28 June 2019
Introduction
STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays
Installed version
These versions are installed and and currently available ...
... on envirnoment hpc-uniol-env:
STAR/2.5.4b-intel-2016b
... on environment hpc-env/6.4:
STAR/2.6.1d-foss-2017b
Using STAR
If you want to find out more about STAR on the HPC Cluster, you can use the command
module spider STAR
This will show you basic informations e.g. a short description and the currently installed version.
To load the desired version of the module, use the command, e.g.
module load hpc-env/6.4 module load STAR
Always remember: this command is case sensitive!
Documentation
A short summary about the functions and benefits of STAR can be read here
The full documentation can be found here (pdf reader required).
