Difference between revisions of "Picard"
From HPC users
Jump to navigationJump to search
(Created page with "== Introduction == Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats ...") |
|||
| Line 1: | Line 1: | ||
== Introduction == | == Introduction == | ||
Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See especially the [http://samtools.github.io/hts-specs/SAMv1.pdf SAM specification] and the [http://samtools.github.io/hts-specs/VCFv4.3.pdf VCF specification]. | Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See especially the [http://samtools.github.io/hts-specs/SAMv1.pdf SAM specification] (PDF) and the [http://samtools.github.io/hts-specs/VCFv4.3.pdf VCF specification] (PDF). | ||
== Installed version == | == Installed version == | ||
Revision as of 12:59, 30 March 2017
Introduction
Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See especially the SAM specification (PDF) and the VCF specification (PDF).
Installed version
Using Picard on the HPC cluster
Documentation
You can find the full documentation
