Difference between revisions of "MAFFT 2016"
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Schwietzer (talk | contribs) (Created page with "== Introduction == MAFFT is a multiple alignment program for amino acid or nucleotide sequences. [https://mafft.cbrc.jp/alignment/software/source.html ¹] == Installed version...") |
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Always remember: this command is case sensitive! | Always remember: this command is case sensitive! | ||
After loading MAFFT, you can start MAFFT either by just calling <tt>mafft</tt>. In this case, MAFFT will ask to enter an input file and an output file. You can shorten this process by simply entering input and output files when calling MAFFT: | After loading MAFFT, you can start MAFFT either by just calling <tt>mafft</tt>. In this case, MAFFT will ask you to enter an input file and an output file. You can shorten this process by simply entering input and output files when calling MAFFT: | ||
mafft input > output | mafft input > output | ||
Latest revision as of 14:21, 26 May 2021
Introduction
MAFFT is a multiple alignment program for amino acid or nucleotide sequences. ¹
Installed version(s)
The following versions are installed and currently available...
... on environment hpc-env/8.3:
- MAFFT/7.475-GCC-8.3.0-with-extensions
Loading / Using MAFFT
To load the desired version of the module, use the module load command, e.g.
module load hpc-env/8.3 module load MAFFT
Always remember: this command is case sensitive!
After loading MAFFT, you can start MAFFT either by just calling mafft. In this case, MAFFT will ask you to enter an input file and an output file. You can shorten this process by simply entering input and output files when calling MAFFT:
mafft input > output
Documentation
The full documentation can be found here.
