|
|
| Line 3: |
Line 3: |
| This page was created to give you an overview of the installed software on the cluster. The list will be updated once per week. | | This page was created to give you an overview of the installed software on the cluster. The list will be updated once per week. |
|
| |
|
| The available software is listed in the format: '''name, version'''
| |
|
| |
|
| |
| *ATLAS/3.10.2
| |
| *Anaconda3/4.3.0
| |
| *Armadillo/7.500.1
| |
| *Autotools/20150215
| |
| *BCFtools/1.3.1
| |
| *BEDTools/2.26.0
| |
| *BLAST/2.2.26
| |
| *BLAST/2.6.0
| |
| *BLAT/3.5
| |
| *BamTools/2.4.0
| |
| *Beast/2.4.5
| |
| *BioPerl/1.7.0
| |
| *Biopython/1.68
| |
| *Bison/3.0.4
| |
| *Boost/1.61.0-goolf-5.2.01
| |
| *Boost/1.61.0-intel-2016b
| |
| *Bowtie/1.1.2
| |
| *Bowtie2/2.2.9
| |
| *CD-HIT/4.6.4
| |
| *CDO/1.7.2-intel-2016b
| |
| *CFITSIO/3.410
| |
| *CMake/2.8.12
| |
| *CMake/3.6.2
| |
| *CP2K/
| |
| CP2K/3.0
| |
| CUDA-Blas/
| |
| CUDA-Blas/8.0.44
| |
| CUDA-FFT/
| |
| CUDA-FFT/8.0.44
| |
| CUDA-Profiler/
| |
| CUDA-Profiler/8.0.44
| |
| CUDA-Toolkit/
| |
| CUDA-Toolkit/8.0.44
| |
| CUDA-Visual-Profiler/
| |
| CUDA-Visual-Profiler/8.0.44
| |
| Cube/
| |
| Cube/4.3.4
| |
| EGSnrc/
| |
| EGSnrc/2017
| |
| ESMF/
| |
| ESMF/7.0.0
| |
| EasyBuild/
| |
| EasyBuild/3.0.0
| |
| Eigen/
| |
| Eigen/3.2.9
| |
| FASTX-Toolkit/
| |
| FASTX-Toolkit/0.0.14
| |
| FFTW/
| |
| FFTW/3.3.5-gompi-5.2.01
| |
| FFmpeg/
| |
| FFmpeg/3.1.3-intel-2016b
| |
| FIAT/
| |
| FIAT/1.6.0-intel-2016b-Python-2.7.12
| |
| FastQC/
| |
| FastQC/0.11.5
| |
| GCC/
| |
| GCC/4.9.4-2.25
| |
| GCC/5.4.0-2.26
| |
| GCC/6.2.0-2.27
| |
| GMP/
| |
| GMP/6.1.0-intel-2016b
| |
| GMP/6.1.1
| |
| GMT/
| |
| GMT/5.3.1
| |
| GSL/
| |
| GSL/2.1
| |
| Geant4/
| |
| Geant4/9.6.p04-intel-2016b
| |
| Geant4/9.6.p04
| |
| Geant4/10.02.p01
| |
| Ghostscript/
| |
| Ghostscript/9.19-intel-2016b
| |
| GraphicsMagick/
| |
| GraphicsMagick/1.3.25-intel-2016b
| |
| Gurobi/
| |
| Gurobi/7.0.2
| |
| HDF/
| |
| HDF/4.2.11-intel-2016b
| |
| HDF5/
| |
| HDF5/1.8.17-intel-2016b
| |
| Hypre/
| |
| Hypre/2.11.1
| |
| IGV/
| |
| IGV/2.3.80
| |
| IGVTools/
| |
| IGVTools/2.3.75
| |
| Java/
| |
| Java/8.112
| |
| LLVM/
| |
| LLVM/3.8.1-goolf-5.2.01
| |
| LLVM/3.8.1-intel-2016b
| |
| LLVM/3.9.0-intel-2016b
| |
| Lighter/
| |
| Lighter/1.0
| |
| LinBox/
| |
| LinBox/1.4.0
| |
| Lumpy/
| |
| Lumpy/0.1
| |
| M4/
| |
| M4/1.4.17
| |
| MATLAB/
| |
| MATLAB/2016b
| |
| MPFR/
| |
| MPFR/3.1.4
| |
| NAG_Fortran/
| |
| NAG_Fortran/5.2
| |
| NCL/
| |
| NCL/6.3.0-intel-2016b
| |
| NCO/
| |
| NCO/4.6.0-intel-2016b
| |
| NTL/
| |
| NTL/9.8.1
| |
| NextGenMap/
| |
| NextGenMap/0.5.2
| |
| Nvidia-Tesla-GDK/
| |
| Nvidia-Tesla-GDK/352.79
| |
| ORCA/
| |
| ORCA/3.0.3
| |
| ORCA/4.0.0
| |
| OTF2/
| |
| OTF2/2.0
| |
| Octave/
| |
| Octave/4.0.3
| |
| OpenBLAS/
| |
| OpenBLAS/0.2.19
| |
| OpenCV/
| |
| OpenCV/3.1.0-intel-2016b
| |
| OpenFOAM/
| |
| OpenFOAM-Extend/
| |
| OpenFOAM-Extend/3.2
| |
| OpenFOAM/1.7.1
| |
| OpenFOAM/2.1.1
| |
| OpenFOAM/2.3.1
| |
| OpenFOAM/2.4.0
| |
| OpenFOAM/3.0.1
| |
| OpenFOAM/4.0
| |
| OpenFOAM/4.1-gcc
| |
| OpenFOAM/4.1-se
| |
| OpenFOAM/4.1
| |
| OpenMPI/
| |
| OpenMPI/1.10.4-GCC-4.9.4
| |
| OpenMPI/2.0.1-GCC-5.4.0
| |
| OpenMPI/2.0.1-GCC-6.2.0
| |
| OpenMPI/2.0.2-GCC-5.4.0-2.26
| |
| PALMDependencies/
| |
| PALMDependencies/all
| |
| PGI/
| |
| PGI/12.10
| |
| PGI/15.10
| |
| PGI/16.10
| |
| PLUMED/
| |
| PLUMED/2.2.3
| |
| ParaView/
| |
| ParaView/5.1.2-goolf-5.2.01-mpi
| |
| ParaView/5.1.2-intel-2016b-mpi
| |
| Perl/
| |
| Perl/5.20.3
| |
| Python/
| |
| Python/2.7.11-intel-2016b
| |
| Python/2.7.12
| |
| Python/3.5.2
| |
| Qhull/
| |
| Qhull/2015.2
| |
| Qt/
| |
| Qt/4.8.7-goolf-5.2.01
| |
| R/
| |
| R/3.3.1
| |
| SAMtools/
| |
| SAMtools/1.3.1
| |
| SIONlib/
| |
| SIONlib/1.6.1
| |
| SOAPdenovo2/
| |
| SOAPdenovo2/r240
| |
| SQLite/
| |
| SQLite/3.9.2-intel-2016b
| |
| SQLite/3.13.0-goolf-5.2.01
| |
| SQLite/3.13.0-intel-2016b
| |
| ScaLAPACK/
| |
| ScaLAPACK/2.0.2
| |
| Scalasca/
| |
| Scalasca/2.3
| |
| ScientificPython/
| |
| ScientificPython/2.9.4-Python-2.7.12
| |
| Stacks/
| |
| Stacks/1.42
| |
| SuiteSparse/
| |
| SuiteSparse/4.5.3
| |
| Tcl/
| |
| Tcl/8.6.4-intel-2016b
| |
| ThetaDependencies/
| |
| ThetaDependencies/all
| |
| Tk/
| |
| Tk/8.6.4-intel-2016b-no-X11
| |
| Trinity/
| |
| Trinity/2.2.0
| |
| UDUNITS/
| |
| UDUNITS/2.2.20-intel-2016b
| |
| VCFtools/
| |
| VCFtools/0.1.14
| |
| Valgrind/
| |
| Valgrind/3.12.0
| |
| ViennaRNA/
| |
| ViennaRNA/2.3.1
| |
| WPS/
| |
| WPS/3.6.1
| |
| WPS/3.7.1
| |
| WPS/3.8.0
| |
| WPS/3.8.1
| |
| WRF/
| |
| WRF/3.6.1
| |
| WRF/3.7.1
| |
| WRF/3.8.0
| |
| WRF/3.8.1
| |
| WRFGeodata/
| |
| WRFGeodata/all
| |
| WRFGeodata/3.8
| |
| XZ/
| |
| XZ/5.2.2-intel-2016b
| |
| Xerces-C++/
| |
| Xerces-C++/3.1.3
| |
| Yasm/
| |
| Yasm/1.3.0
| |
| acml/gcc-int64/64/
| |
| acml/gcc-int64/64/5.3.1
| |
| acml/gcc-int64/fma4/
| |
| acml/gcc-int64/fma4/5.3.1
| |
| acml/gcc-int64/mp/64/
| |
| acml/gcc-int64/mp/64/5.3.1
| |
| acml/gcc-int64/mp/fma4/
| |
| acml/gcc-int64/mp/fma4/5.3.1
| |
| acml/gcc/64/
| |
| acml/gcc/64/5.3.1
| |
| acml/gcc/fma4/
| |
| acml/gcc/fma4/5.3.1
| |
| acml/gcc/mp/64/
| |
| acml/gcc/mp/64/5.3.1
| |
| acml/gcc/mp/fma4/
| |
| acml/gcc/mp/fma4/5.3.1
| |
| acml/intel-int64/64/
| |
| acml/intel-int64/64/5.3.1
| |
| acml/intel-int64/fma4/
| |
| acml/intel-int64/fma4/5.3.1
| |
| acml/intel-int64/mp/64/
| |
| acml/intel-int64/mp/64/5.3.1
| |
| acml/intel-int64/mp/fma4/
| |
| acml/intel-int64/mp/fma4/5.3.1
| |
| acml/intel/64/
| |
| acml/intel/64/5.3.1
| |
| acml/intel/fma4/
| |
| acml/intel/fma4/5.3.1
| |
| acml/intel/mp/64/
| |
| acml/intel/mp/64/5.3.1
| |
| acml/intel/mp/fma4/
| |
| acml/intel/mp/fma4/5.3.1
| |
| acml/open64-int64/64/
| |
| acml/open64-int64/64/5.3.1
| |
| acml/open64-int64/fma4/
| |
| acml/open64-int64/fma4/5.3.1
| |
| acml/open64-int64/mp/64/
| |
| acml/open64-int64/mp/64/5.3.1
| |
| acml/open64-int64/mp/fma4/
| |
| acml/open64-int64/mp/fma4/5.3.1
| |
| acml/open64/64/
| |
| acml/open64/64/5.3.1
| |
| acml/open64/fma4/
| |
| acml/open64/fma4/5.3.1
| |
| acml/open64/mp/64/
| |
| acml/open64/mp/64/5.3.1
| |
| acml/open64/mp/fma4/
| |
| acml/open64/mp/fma4/5.3.1
| |
| bcl2fastq2/
| |
| bcl2fastq2/2.18.0.12
| |
| blas/gcc/64/
| |
| blas/gcc/64/3.6.0
| |
| blas/open64/64/
| |
| blas/open64/64/3.6.0
| |
| bonnie++/
| |
| bonnie++/1.97.1
| |
| bwa.kit/
| |
| bwa.kit/0.7.12
| |
| cluster-tools/
| |
| cluster-tools/7.3
| |
| cmd
| |
| cmgui/
| |
| cmgui/7.3
| |
| configurable-http-proxy/
| |
| configurable-http-proxy/1.3.0-intel-2016b-nodejs-4.4.7
| |
| cuDNN/
| |
| cuDNN/5.1-CUDA-8.0.44
| |
| cuda75/blas/
| |
| cuda75/blas/7.5.18
| |
| cuda75/fft/
| |
| cuda75/fft/7.5.18
| |
| cuda75/nsight/
| |
| cuda75/nsight/7.5.18
| |
| cuda75/profiler/
| |
| cuda75/profiler/7.5.18
| |
| cuda75/toolkit/
| |
| cuda75/toolkit/7.5.18
| |
| cuda80/blas/
| |
| cuda80/blas/8.0.44
| |
| cuda80/fft/
| |
| cuda80/fft/8.0.44
| |
| cuda80/gdk/
| |
| cuda80/gdk/352.79
| |
| cuda80/nsight/
| |
| cuda80/nsight/8.0.44
| |
| cuda80/profiler/
| |
| cuda80/profiler/8.0.44
| |
| cuda80/toolkit/
| |
| cuda80/toolkit/8.0.44
| |
| cutadapt/
| |
| cutadapt/1.9.1
| |
| default-environment
| |
| dot
| |
| fluka/
| |
| fluka/2011.2c
| |
| foss/
| |
| foss/2016b
| |
| freeipmi/
| |
| freeipmi/1.5.2
| |
| g2clib/
| |
| g2clib/1.4.0-intel-2016b
| |
| g2lib/
| |
| g2lib/1.4.0-intel-2016b
| |
| gaussian/
| |
| gaussian/g09.b01
| |
| gaussian/g09.d01
| |
| gcc/
| |
| gcc/6.1.0
| |
| gdb/
| |
| gdb/7.11
| |
| gettext/
| |
| gettext/0.19.8
| |
| gnuplot/
| |
| gnuplot/5.0.5-intel-2016b
| |
| gompi/
| |
| gompi/4.1.10
| |
| gompi/5.2.01
| |
| gompi/6.2.01
| |
| goolf/
| |
| goolf/5.2.01
| |
| grace/
| |
| grace/5.1.25
| |
| grib_api/
| |
| grib_api/1.16.0-intel-2016b
| |
| hdf5/
| |
| hdf5/1.6.10
| |
| hdf5_18/
| |
| hdf5_18/1.8.17
| |
| hpc-uniol-env
| |
| hpl/
| |
| hpl/2.2
| |
| hwloc/
| |
| hwloc/1.11.3
| |
| icc/
| |
| icc/2016.3.210
| |
| ifort/
| |
| ifort/2016.3.210
| |
| iimpi/
| |
| iimpi/2013b
| |
| iimpi/2016b
| |
| imkl/
| |
| imkl/11.3.3.210
| |
| impi/
| |
| impi/5.1.3.210
| |
| intel/
| |
| intel-cluster-checker/
| |
| intel-cluster-checker/2.2.2
| |
| intel-cluster-runtime/ia32/
| |
| intel-cluster-runtime/ia32/3.8
| |
| intel-cluster-runtime/intel64/
| |
| intel-cluster-runtime/intel64/3.8
| |
| intel-cluster-runtime/mic/
| |
| intel-cluster-runtime/mic/3.8
| |
| intel-tbb-oss/ia32/
| |
| intel-tbb-oss/ia32/2017_20161128oss
| |
| intel-tbb-oss/intel64/
| |
| intel-tbb-oss/intel64/2017_20161128oss
| |
| intel/2013b
| |
| intel/2016b
| |
| intel/compiler/64/16.0.4/
| |
| intel/compiler/64/16.0.4/2016.4.258
| |
| intel/mkl/64/11.3.4/
| |
| intel/mkl/64/11.3.4/2016.4.258
| |
| intel/mkl/mic/11.3.4/
| |
| intel/mkl/mic/11.3.4/2016.4.258
| |
| intel/mpi/64/5.1.3/
| |
| intel/mpi/64/5.1.3/2016.4.258
| |
| intel/mpi/mic/5.1.3/
| |
| intel/mpi/mic/5.1.3/2016.4.258
| |
| iozone/
| |
| iozone/3_434
| |
| iperf/
| |
| iperf/3.1
| |
| ipmitool/
| |
| ipmitool/1.8.17
| |
| lapack/gcc/64/
| |
| lapack/gcc/64/3.6.0
| |
| lapack/open64/64/
| |
| lapack/open64/64/3.6.0
| |
| leda/
| |
| leda/6.3
| |
| lenovo-tools
| |
| libX11/
| |
| libX11/1.6.3-intel-2016b
| |
| libpng/
| |
| libpng/1.6.24
| |
| libtool/
| |
| libtool/2.4.6
| |
| libxml2/
| |
| libxml2/2.9.4
| |
| maple/
| |
| maple/18
| |
| maple/2016
| |
| module-git
| |
| module-info
| |
| motif/
| |
| motif/2.3.6
| |
| mpich/ge/gcc/64/
| |
| mpich/ge/gcc/64/3.2rc2
| |
| mpich/ge/open64/64/
| |
| mpich/ge/open64/64/3.2rc2
| |
| mpiexec/
| |
| mpiexec/0.84_432
| |
| mvapich2/gcc/64/
| |
| mvapich2/gcc/64/2.2rc1
| |
| mvapich2/open64/64/
| |
| mvapich2/open64/64/2.2rc1
| |
| ncurses/
| |
| ncurses/6.0
| |
| ncview/
| |
| ncview/2.1.7-intel-2016b
| |
| netCDF/
| |
| netCDF-Fortran/
| |
| netCDF-Fortran/4.4.4-intel-2016b
| |
| netCDF/4.4.1-intel-2016b
| |
| netcdf/gcc/64/4.4.0
| |
| netcdf/open64/64/4.4.0
| |
| netperf/
| |
| netperf/2.7.0
| |
| nodejs/
| |
| nodejs/4.4.7-intel-2016b
| |
| null
| |
| open64/
| |
| open64/4.5.2.1
| |
| openblas/dynamic/
| |
| openblas/dynamic/0.2.18
| |
| openlava/
| |
| openlava/3.3.3
| |
| openldap
| |
| openmpi/cuda/64/
| |
| openmpi/cuda/64/1.10.1
| |
| openmpi/gcc/64/
| |
| openmpi/gcc/64/1.10.1
| |
| openmpi/intel/64/
| |
| openmpi/intel/64/1.10.1
| |
| openmpi/open64/64/
| |
| openmpi/open64/64/1.10.1
| |
| path.py/
| |
| path.py/8.2.1-intel-2016b-Python-3.5.2
| |
| pgi/64/
| |
| pgi/64/16.5
| |
| sge/
| |
| sge/2011.11p1
| |
| shared
| |
| slurm/
| |
| slurm/current
| |
| slurm/16.05.8
| |
| stata/
| |
| stata/13
| |
| testpath/
| |
| testpath/0.3-intel-2016b-Python-3.5.2
| |
| torque/
| |
| torque/6.0.2
| |
| tree/
| |
| tree/1.7.0
| |
| util-linux/
| |
| util-linux/2.29-intel-2016b
| |
| xbitmaps/
| |
| xbitmaps/1.1.1
| |
| xforms/
| |
| xforms/1.2.4
| |
| xorg-macros/
| |
| xorg-macros/1.19.0
| |
| zlib/
| |
| zlib/1.2.8
| |
| zoltan/
| |
| zoltan/3.83
| |
|
| |
|
|
| |
|
| If you want to create this list on your own, you can do this by simply using the command: | | If you want to create a list of every availabe software on the cluster (even the hidden ones), on your own, you can do this by simply using the command: |
| module spider | | module spider |
| | The available software is listed in the format: '''name, version''' |
