IGV and IGVTools

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Introduction

The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets. It supports a wide variety of data types, including array-based and next-generation sequence data, and genomic annotations.

The IGVTools utility provides a set of tools for pre-processing data files. File names must contain an accepted file extension, e.g. test-xyz.bam. Tools include:

  • toTDF
  • count
  • index
  • sort

Installed version

The currently installed version of IGV is 2.3.80 and the version of IGVTools is 2.3.75.

Documentation