BamTools
From HPC users
Revision as of 11:44, 17 January 2017 by Brunken (talk | contribs) (→Using BEDtools with the HPC Cluster)
Introduction
BamTools provides a small, but powerful suite of command-line utility programs for manipulating and querying BAM files for data.
Installed version
The currently installed version is 2.4.0.
Using BamTools with the HPC Cluster
If you want to find out more about BEDtools on the HPC Cluster, you can use the command
module spider bamtools
This will show you basic informations e.g. a short description and the currently installed version.
To load the desired version of the module, use the command
module load BamTools/2.4.0-intel-2016b
Always remember: this command is case sensitive!
After loading the module, you can use the program with
bamtools <COMMAND> [ARGS]
Documentation
Further Information can be found on the project website.
