Difference between revisions of "BRAKER2 2016"
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For further Information, visit the developers [https://github.com/Gaius-Augustus/BRAKER| website] | For further Information, visit the developers [https://github.com/Gaius-Augustus/BRAKER | website] | ||
Revision as of 16:30, 28 September 2018
Introduction
BRAKER2 is a combination of GeneMark-ET and AUGUSTUS, that uses genomic and RNA-Seq data to automatically generate full gene structure annotations in novel genomes.
GeneMark and AUGUSTS are independently installed as dependencies for BRAKER2.
Installed Version
BRAKER2/2.1.2 Installed on hpc-env/6.4
Using BRAKER2
In order to use BRAKER2 you primarily have to change into the newer environment:
module load hpc-env/6.4
module load BRAKER2
Documentation
To get a quick overview of the commands available for BRAKER2, just type braker.pl into the console after loading the module. You will then get a short summary of the commands for BRAKER2.
For further Information, visit the developers | website
