MAFFT 2016
From HPC users
Introduction
MAFFT is a multiple alignment program for amino acid or nucleotide sequences. ¹
Installed version(s)
The following versions are installed and currently available...
... on environment hpc-env/8.3:
- MAFFT/7.475-GCC-8.3.0-with-extensions
Loading / Using MAFFT
To load the desired version of the module, use the module load command, e.g.
module load hpc-env/8.3 module load MAFFT
Always remember: this command is case sensitive!
After loading MAFFT, you can start MAFFT either by just calling mafft. In this case, MAFFT will ask you to enter an input file and an output file. You can shorten this process by simply entering input and output files when calling MAFFT:
mafft input > output
Documentation
The full documentation can be found here.
