TopHat 2016

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Introduction

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes, and then analyzes the mapping results to identify splice junctions between exons.¹

Installed version

The currently installed version is


Using XXXXXXXXXX

If you want to find out more about XXXXXXXXXXX on the HPC Cluster, you can use the command

module spider XXXXXXXXXXXXX

This will show you basic informations e.g. a short description and the currently installed version.

To load the desired version of the module, use the command, e.g.

module load  XXXXXXXXXXXXXXXXXx

Always remember: this command is case sensitive!


Documentation

The full documentation can be found [ here].