Difference between revisions of "Stacks"
From HPC users
Jump to navigationJump to search
| Line 1: | Line 1: | ||
== Introduction == | == Introduction == | ||
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. | |||
== Installed version == | == Installed version == | ||
Revision as of 09:12, 29 March 2017
Introduction
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
Installed version
Using Stacks on the HPC cluster
Documentation
A manual for Stacks can be found here here.
