Difference between revisions of "REPET 2016"

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== Documentation ==
== Documentation ==


The full documentation can be found [ here].
You can read [https://biosphere.france-bioinformatique.fr/wikia2/index.php/REPET_practical_course_urgi here] how to start working with REPET.

Revision as of 10:45, 25 June 2019

Introduction

"The REPET package ( Flutre T. et al, 2011 , Quesneville H. et al. 2005 ) integrates bioinformatics programs in order to tackle biological issues at the genomic scale."¹

Installed version

The currently installed version is available on environment hpc-env/6.4:

REPET/2.5-foss-2017b-Python-2.7.14

Using REPET

If you want to find out more about REPET on the HPC Cluster, you can use the command

module spider REPET

This will show you basic informations e.g. a short description and the currently installed version.

To load the desired version of the module, use the command, e.g.

module load hpc-env 6.4
module load REPET

Always remember: this command is case sensitive!


Documentation

You can read here how to start working with REPET.