Difference between revisions of "R 2016"
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R is a free software environment for statistical computing and graphics. | R is a free software environment for statistical computing and graphics. | ||
== Using R on the HPC cluster == | |||
If you want to use R on the HPC cluster, you will have to load its module. You can do that by using the command | If you want to use R on the HPC cluster, you will have to load its module. You can do that by using the command | ||
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you will find more informations about the module. | you will find more informations about the module. | ||
== Installed version == | |||
The currently installed version of R is '''3.3.1'''. | The currently installed version of R is '''3.3.1'''. | ||
=== Additional installed packages === | |||
The R release contains a lot of additional packages. After loading and starting R ("module load R" and simply "R" on the command line), you can generate a list of all of them by using the following commands | The R release contains a lot of additional packages. After loading and starting R ("module load R" and simply "R" on the command line), you can generate a list of all of them by using the following commands | ||
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adabag 4.1 | adabag 4.1 | ||
== Documentation == | |||
You can look up anything about R on their | You can look up anything about R on their | ||
*[https://www.rdocumentation.org/ documentation pages] | *[https://www.rdocumentation.org/ documentation pages] | ||
*[https://cran.r-project.org/manuals.html manual pages] | *[https://cran.r-project.org/manuals.html manual pages] | ||
Revision as of 08:51, 27 March 2017
Introduction
R is a free software environment for statistical computing and graphics.
Using R on the HPC cluster
If you want to use R on the HPC cluster, you will have to load its module. You can do that by using the command
module load R
Since there is only one version of R installed, you dont need to specify a version. If you use the command
module spider R
you will find more informations about the module.
Installed version
The currently installed version of R is 3.3.1.
Additional installed packages
The R release contains a lot of additional packages. After loading and starting R ("module load R" and simply "R" on the command line), you can generate a list of all of them by using the following commands
ip <- as.data.frame(installed.packages()[,c(1,3:4)]) rownames(ip) <- NULL ip <- ip[is.na(ip$Priority),1:2,drop=FALSE] print(ip, row.names=FALSE)
You will receive a list of every package and its related version. It should look like this:
Package Version
abc 2.1
abc.data 1.0
abind 1.4-3
acepack 1.3-3.3
adabag 4.1
Documentation
You can look up anything about R on their
