Difference between revisions of "Biopython"
Schwietzer (talk | contribs) |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 5: | Line 5: | ||
== Installed version == | == Installed version == | ||
These versions are installed and and currently available ... | |||
... on envirnoment ''hpc-uniol-env'': | |||
'''Biopython/1.68''' | |||
... on environment ''hpc-env/6.4'': | |||
'''Biopython/1.71'''-intel-2018a-Python-2.7.14 | |||
'''Biopython/1.71'''-intel-2018a-Python-3.7.0 | |||
... on envirnoment ''hpc-env/8.3'': | |||
'''Biopython/1.78'''-foss-2019b-Python-3.7.4 | |||
== Documentation == | == Documentation == | ||
The full documentation can be found [http://biopython.org/wiki/Documentation here]. | The full documentation can be found [http://biopython.org/wiki/Documentation here]. | ||
Latest revision as of 10:36, 25 August 2021
Introduction
The Biopython Project is an open-source collection of non-commercial Python tools for computational biology and bioinformatics, created by an international association of developers. It contains classes to represent biological sequences and sequence annotations, and it is able to read and write to a variety of file formats. It also allows for a programmatic means of accessing online databases of biological information, such as those at NCBI. Separate modules extend Biopython's capabilities to sequence alignment, protein structure, population genetics, phylogenetics, sequence motifs, and machine learning. Biopython is one of a number of Bio* projects designed to reduce code duplication in computational biology.
Installed version
These versions are installed and and currently available ...
... on envirnoment hpc-uniol-env:
Biopython/1.68
... on environment hpc-env/6.4:
Biopython/1.71-intel-2018a-Python-2.7.14 Biopython/1.71-intel-2018a-Python-3.7.0
... on envirnoment hpc-env/8.3:
Biopython/1.78-foss-2019b-Python-3.7.4
Documentation
The full documentation can be found here.
