Difference between revisions of "Install wrf intel double.sh"
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Albensoeder (talk | contribs) (Created page with "'''Note:''' * The commands in the box below has to be stored in file called ''install_wrf_intel_double.sh''. * To execute the script please set the execution permissions by ''c...") |
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################################################################## | ################################################################## | ||
# go into directory WRF to make WRF with | # go into directory WRF to make WRF with double precision | ||
################################################################## | ################################################################## | ||
Latest revision as of 15:47, 25 January 2013
Note:
- The commands in the box below has to be stored in file called install_wrf_intel_double.sh.
- To execute the script please set the execution permissions by chmod 755 install_wrf_intel_double.sh.
- usage is install_wrf_intel_double.sh WRF_RELEASE DIR_TO_TAR_GZ_FILES
- The final installation of WRF and WPS will be in the directories WRFV3_v${WRF_RELEASE}_intel_double and WPS_v${WRF_RELEASE]_intel_double, respectively
- The orginal folders WRFV3 and WPS will be removed during the installation process!
#!/bin/bash # Web site: http://www.mmm.ucar.edu/wrf/OnLineTutorial/index.htm HELP_MSG="Installation program for WRF on flow with intel compilers and intel mpi with double precision\n\nusage:\n install_wrf_intel.sh WRF_VERSION WRF_TAR_DIR\n" # check number od cmdline args if [ $# != 2 ]; then echo -e $HELP_MSG exit 1 fi WRF_VERSION=$1 WPS_SRC_DIR=$2 BUILD_SUFFIX=v${WRF_VERSION}_intel_double export WRF_INST_DIR=WRFV3_$BUILD_SUFFIX export WPS_INST_DIR=WPS_$BUILD_SUFFIX echo "build $WRF_INST_DIR..." # load modules if [ "$LOADEDMODULES" != "" ]; then echo 'clean and load module' echo "Please answer following quesion with 'y' to enable a clean setup!" module clear fi module load shared module load netcdf/4.2.1.1/intel/64/2011.0.013 module load netcdf-fortran/4.2/intel/64/2011.0.013 module load intel/impi/64/4.1.0.024 module load intel/ics/64/2013.0.028 module load jasper/1.900.1/intel/64/2011.0.013 # check compiler version ICC_VERSION=`icc --version|head -1|awk '{print $3}'` echo -e "icc version $ICC_VERSION" if [ $ICC_VERSION != "13.0.1" ]; then echo -e "ERROR: icc version $ICC_VERSION is not correct!" exit 1 fi # check untar files echo "untar files..." if [ ! -e $WPS_SRC_DIR/WRFV${WRF_VERSION}.TAR.gz ]; then echo -e "Source tar-ball\n $WPS_SRC_DIR/WRFV${WRF_VERSION}.TAR.gz\n does not exist!" exit 1 fi if [ ! -e $WPS_SRC_DIR/WPSV${WRF_VERSION}.TAR.gz ]; then echo -e "Source tar-ball\n $WPS_SRC_DIR/WRFV${WRF_VERSION}.TAR.gz\n does not exist!" exit 1 fi rm -rf WRFV3 WPS $WRF_INST_DIR $WPS_INST_DIR tar -xzf $WPS_SRC_DIR/WRFV${WRF_VERSION}.TAR.gz tar -xzf $WPS_SRC_DIR/WPSV${WRF_VERSION}.TAR.gz # mv build mv WRFV3 $WRF_INST_DIR mv WPS $WPS_INST_DIR ################################################################## # go into directory WRF to make WRF with single precision # for wps ################################################################## cd $WRF_INST_DIR # set intel compilers export I_MPI_CC=icc export I_MPI_CXX=icpc export I_MPI_FC=ifort export I_MPI_F77=ifort export I_MPI_F90=ifort # parallel build on 8 cores export J='-j 8' # set right netcdf by export NETCDF=${NETCDFF_HOME} # set jasper by export JASPERINC=/cm/shared/apps/jasper/1.900.1/intel/64/2011.0.013/include export JASPERLIB=/cm/shared/apps/jasper/1.900.1/intel/64/2011.0.013/lib sed -e 's/I_really_want_to_output_grib2_from_WRF = "FALSE"/I_really_want_to_output_grib2_from_WRF = "TRUE"/' arch/Config_new.pl > arch/Config_new.pl_new mv arch/Config_new.pl_new arch/Config_new.pl # enable large file support export WRFIO_NCD_LARGE_FILE_SUPPORT=1 # linux intel cluster export WRF_EM_CORE=1 # run configure and select # 15 # 1 (basic) ./clean -a >& /dev/null case $WRF_VERSION in 3.4.1 ) echo -e "15\n1\n" | ./configure &> configure.log ;; 3.4 ) echo -e "15\n1\n" | ./configure &> configure.log ;; * ) echo "WRV3 release not supported yet. Please configure!" exit 1 ;; esac # make settings for intel mpi sed -e 's/-lnetcdff -lnetcdf/-lnetcdff -L$(NETCDF_DIR) -lnetcdf/' \ -e 's/-fno-ip/-no-ip/g' \ -e 's/-O3/-O3 -heap-arrays -fp-model precise/g' \ -e 's/^DM_CC.*/DM_CC\ \=\ mpicc -DMPI2_SUPPORT/' \ -e 's/^DM_FC.*/DM_FC\ \=\ mpif90/' configure.wrf >configure.wrf.impi mv configure.wrf.impi configure.wrf # compile and log compilation echo 'compile WRF for WPS in single precision...' ./compile em_real >& compile.log if [ $? != "0" ]; then echo "Error in building WRF" exit 1 fi # check existance of binaries BIN_NAMES="main/real.exe main/ndown.exe main/nup.exe main/wrf.exe main/tc.exe" for name in $BIN_NAMES; do if [ ! -x $name ]; then echo "Binary $name not exist! WRF was not build correctly!" exit 1 fi done ################################################################## # go into directory WPS to make WPS ################################################################## # make now WPS # so change directory and clean it for safity cd ../$WPS_INST_DIR echo "build $WPS_INST_DIR..." ./clean -a >& /dev/null # # patch files sed -e 's/BIG_ENDIAN/MY_BIG_ENDIAN/g' \ -e 's/LITTLE_ENDIAN/MY_LITTLE_ENDIAN/g' geogrid/src/read_geogrid.c > geogrid/src/read_geogrid.c_patched mv geogrid/src/read_geogrid.c_patched geogrid/src/read_geogrid.c # run configure and select # 15 (3.4), 19 (v3.4.1) case $WRF_VERSION in 3.4.1 ) echo -e "19" | ./configure &> configure.log ;; 3.4 ) echo -e "15" | ./configure &> configure.log ;; * ) echo "WPS release not supported yet. Please configure!" exit 1 ;; esac # make settings for intel mpi sed -e 's/^WRF_DIR.*/WRF_DIR = ..\/$(WRF_INST_DIR)/' \ -e 's/-lnetcdff -lnetcdf/-lnetcdff -L$(NETCDF_DIR) -lnetcdf/' \ -e 's/^DM_CC.*/DM_CC\ \=\ mpicc/' \ -e 's/^DM_FC.*/DM_FC\ \=\ mpif90/' \ -e 's/^SCC.*/SCC\ \=\ icc/' configure.wps > configure.wps.tmp mv configure.wps.tmp configure.wps # compile and log compilation echo 'compile WPS...' ./compile >& compile.log if [ $? != "0" ]; then echo "Error in building WPS" exit 1 fi # check existance of binaries BIN_NAMES="geogrid/src/geogrid.exe metgrid/src/metgrid.exe ungrib/src/ungrib.exe util/rd_intermediate.exe" for name in $BIN_NAMES; do if [ ! -x $name ]; then echo "Binary $name not exist! WPS was not build correctly!" exit 1 fi done # and go back to root install dir cd .. ################################################################## # Now build the final version of WRF again with double precision ################################################################## rm -rf $WRF_INST_DIR tar -xzf $WPS_SRC_DIR/WRFV${WRF_VERSION}.TAR.gz # mv build mv WRFV3 $WRF_INST_DIR ################################################################## # go into directory WRF to make WRF with double precision ################################################################## cd $WRF_INST_DIR # set jasper by sed -e 's/I_really_want_to_output_grib2_from_WRF = "FALSE"/I_really_want_to_output_grib2_from_WRF = "TRUE"/' arch/Config_new.pl > arch/Config_new.pl_new mv arch/Config_new.pl_new arch/Config_new.pl # run configure and select # 15 # 1 (basic) ./clean -a >& /dev/null case $WRF_VERSION in 3.4.1 ) echo -e "15\n1\n" | ./configure &> configure.log ;; 3.4 ) echo -e "15\n1\n" | ./configure &> configure.log ;; * ) echo "WRV3 release not supported yet. Please configure!" exit 1 ;; esac # make settings for intel mpi sed -e 's/-lnetcdff -lnetcdf/-lnetcdff -L$(NETCDF_DIR) -lnetcdf/' \ -e 's/-fno-ip/-no-ip/g' \ -e 's/-O3/-O3 -heap-arrays -fp-model precise/g' \ -e 's/^RWORDSIZE.*/RWORDSIZE = 8/g' \ -e 's/^PROMOTION.*/PROMOTION = -i4 -r8/g' \ -e 's/^DM_CC.*/DM_CC\ \=\ mpicc -DMPI2_SUPPORT/' \ -e 's/^DM_FC.*/DM_FC\ \=\ mpif90/' configure.wrf >configure.wrf.impi mv configure.wrf.impi configure.wrf # compile and log compilation echo 'compile final WRF with double precision...' ./compile em_real >& compile.log if [ $? != "0" ]; then echo "Error in building WRF" exit 1 fi # check existance of binaries BIN_NAMES="main/real.exe main/ndown.exe main/nup.exe main/wrf.exe main/tc.exe" for name in $BIN_NAMES; do if [ ! -x $name ]; then echo "Binary $name not exist! WRF was not build correctly!" exit 1 fi done ################################################################################# # go back to root directory ################################################################################ cd ..