Difference between revisions of "User environment - The usage of module"

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The modules system uses a hierarchical file structure, i.e., sometimes (whenever there are ambiguities) you may have to specify a path, as in:
The modules system uses a hierarchical file structure, i.e., sometimes (whenever there are ambiguities) you may have to specify a path, as in:
  module load fftw2/gcc/64/double
  module load ics/2013_sp1.3.174/64


To revert all changes made by a given module (environment variables, paths, etc.):
To revert all changes made by a given module (environment variables, paths, etc.):
  module unload <name of the module>
  module unload <name of the module>
You can unload '''all''' currently loaded modules with the command:
module purge
'''Keep in mind that you first have to load "shared" and then "hpc-uniol-env", otherwise the paths to all available modules arent set!'''


A short overview of the options are given in following table (a full list you can get by ''module help'')
A short overview of the options are given in following table (a full list you can get by ''module help'')
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{| style="background-color:#eeeeff;" cellpadding="10" border="1" cellspacing="0"  
{| style="background-color:#eeeeff;" cellpadding="10" border="1" cellspacing="0"  
|- style="background-color:#ddddff;"
|- style="background-color:#ddddff;"
!Command
!Option
!Description
!Description
|-
|-
| ''module list''
| ''avail [<prefix>]''
| Print a list with all loaded modules.
| Shows a list of all available modules. Optionally one can specify a ''prefix'' to limit the output, e.g. ''module avail netcdf'' will show only available modules of netcdf.
|-
| ''purge''
| Remove all loaded modules.  
|-
|-
| ''module help''
| ''help''
| Returns a short help with all available options of the command module.
| Returns a short help with all available options of the command module.
|-
|-
| ''module load <module_name>''
| ''list''
| Print a list with all loaded modules.
|-
| ''load <module_name>''
| Loads the module ''module_name''. If the name includes not the full module name (separated by /) then the latest version of the software is loaded.
| Loads the module ''module_name''. If the name includes not the full module name (separated by /) then the latest version of the software is loaded.
|-
|-
| ''module unload <module_name>''
| ''show <module_name>''
| Remove the module ''module_name''.
|-
| ''module clear''
| Remove all loaded modules.
|-
| ''module show <module_name>''
| Shows additional information about a specific module, e.g. pathen and environment variables set by the module.
| Shows additional information about a specific module, e.g. pathen and environment variables set by the module.
|-
|-
| ''module avail [<prefix>]''
| ''unload <module_name>''
| Shows a list of all available modules. Optionally one can specify a ''prefix'' to limit the output, e.g. ''module avail netcdf'' will show only available modules of netcdf.  
| Remove the module ''module_name''.
|-
|-
|}
|}
</center>
</center>

Latest revision as of 16:10, 21 February 2017

We use the module environment, which has a lot of advantages, is very flexible (and user-friendly), and even allows one to use different versions of the same software concurrently on the same system. You can see a list of all available modules by typing

module avail

To load a given module:

module load <name of the module>

The modules system uses a hierarchical file structure, i.e., sometimes (whenever there are ambiguities) you may have to specify a path, as in:

module load ics/2013_sp1.3.174/64

To revert all changes made by a given module (environment variables, paths, etc.):

module unload <name of the module>

You can unload all currently loaded modules with the command:

module purge

Keep in mind that you first have to load "shared" and then "hpc-uniol-env", otherwise the paths to all available modules arent set!

A short overview of the options are given in following table (a full list you can get by module help)

Option Description
avail [<prefix>] Shows a list of all available modules. Optionally one can specify a prefix to limit the output, e.g. module avail netcdf will show only available modules of netcdf.
purge Remove all loaded modules.
help Returns a short help with all available options of the command module.
list Print a list with all loaded modules.
load <module_name> Loads the module module_name. If the name includes not the full module name (separated by /) then the latest version of the software is loaded.
show <module_name> Shows additional information about a specific module, e.g. pathen and environment variables set by the module.
unload <module_name> Remove the module module_name.