Difference between revisions of "Installed Application Software and Libraries"

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(u.a.: ConnectomeWorkbench FSL BWA FastANI FreeSurfer IQ-TREE MUSCLE SAMtools)
 
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! Software !! Version    !!Toolchain    !!Install Date (D/M/Y)
! Software !! Version    !!Toolchain    !!Install Date (D/M/Y)
|-
|-
| MEGAHIT  || 1.2.|| GCCcore/8.3.0  || 14/11/2022
| ncbi-genome-download  || 0.3.|| GCCcore/8.3.0  || 27/04/2023
|-
|-
| seqtk  ||  1.3-r117-dirty  || GCC/8.3.0  || 14/11/2022
| [[illumina-utils 2016 | illumina-utils]] ||  2.12  || intel/2019b  || 15/03/2023
|-
|-
| quanteda || 3.2.3   || foss/2019b    || 11/10/2022
| [[KrakenUniq 2016 | KrakenUniq]] || 1.0.3 || GCCcore, intel & gompi || 14/03/2023
|-
|-
|   [[jq 2016|jq]] || 1.6 || GCCcore/8.3.0 || 11/10/2022 
| [[KaHIP 2016 | KaHIP]] || 3.14 || gimkl & gompi || 06/03/2023
|-
|-
|   [[ Osrm-backend 2016 | osrm ]] || 3.5.1      ||  foss/2019b    ||   10/10/2022 
| [[ Kaiju 2016 | Kaiju]] || 1.9.||  GCCcore/8.3.0  || 28/02/2023
|-
|-
|   [[ Osmium-Tool 2016 | Osmium-Tool ]] || 1.14.|| foss/2019b    ||   10/10/2022 
| [[FSL 2016 | FSL]] || 6.0.6.2 || SYSTEM || 21/02/2023
|-
|-
|   [[ParMGridGen 2016 | ParMGridGen ]] || 1.0    || gompi/2019b    ||   07/10/2022   
| [[PyTorch 2016 | PyTorch]] || 1.13.1 || conda || 17/02/2023
|-
|-
|   [[Mesquite 2016 |Mesquite ]] || 2.3.0      || GCCcore/8.3.0    || 07/10/2022   
| [[OpenFOAM 2016 | OpenFOAM]] || v2112 || gimkl/2019b & foss/2019b || 14/02/2023
|-
|-
 
| CONCOCT || 1.1.0 || foss/2019b  ||  07/2023
|[[MRtrix 2016 | MRtrix]] || 3.0.3  ||  intel/2019b  || 24/10/2022
|-
| [[Maple 2016 | Maple]] ||  2022    || SYSTEM    ||  29/09/2022
|-
| [[Gurobi 2016 | Gurobi]]    ||    9.5.2  ||    SYSTEM    ||  26/09/2022
|-
| [[pyHyp 2016 | pyHyp]]  || 2.6.0  || Singularity    || 27/09/2022
|-
| solids4foam || v2019    ||  SYSTEM/Conda  || 20/09/2022
|-
| OpenMPI  ||    4.1.1 & 4.1.0       ||   GCC/8.3.0        ||  20/09/2022
|-
|-
|[[Mothur 2016 | Mothur]] ||   1.48.0    ||   foss/2019b      || 20/09/2022
| [[Julia 2016 | Julia]] || 1.8.5 & 1.6.7-LTS || SYSTEM || 03/02/2023
|-
|-
| BlobToolKit      ||   3.3.4        ||   GCCcore/8.3.0      ||  16/09/2022
| CheckM || 1.1.10 || foss/2019b  ||  03/02/2023
|-
|-
| Arrow      || 6.0.0  || foss/2019b ||  13/09/2022
| MetaBAT || 2.15 || gompi/2019b  || 03/02/2023
|-
| [[AMR-Wind 2016 | AMR-Wind]]        ||  2022.09.12  ||  intel/2019 & intelcuda/2022.01  ||  13/09/2022
|-
|  [[Anaconda 2016 |Anaconda3]]      ||  2022.05          ||   SYSTEM      || 08/09/2022
|-
|-
|}
|}
Line 102: Line 87:
*[[BEDTools]]/2.26.0  
*[[BEDTools]]/2.26.0  
*[[BEDTools]]/2.29.2-GCC-8.3.0
*[[BEDTools]]/2.29.2-GCC-8.3.0
*[[BEDTools]]/2.30.0-iccifort-2019b
*[[BLAST]]/2.11.0-Linux_x86_64                                                   
*[[BLAST]]/2.11.0-Linux_x86_64                                                   
*[[BLAST]]/2.2.26                                                     
*[[BLAST]]/2.2.26                                                     
Line 116: Line 102:
*[[BamTools]]/2.5.1-foss-2019b
*[[BamTools]]/2.5.1-foss-2019b
*[[BamTools]]/2.5.1-GCC-8.3.0
*[[BamTools]]/2.5.1-GCC-8.3.0
*[[BamTools]]/2.5.1-foss-2019b
*[[BamTools]]/2.5.1-iccifort-2019b
*[[BBMap 2016 | BBMap]]/38.61b-foss-2017b
*[[BBMap 2016 | BBMap]]/38.61b-foss-2017b
*[[BCFtools]]/1.3.1         
*[[BCFtools]]/1.3.1         
Line 151: Line 137:
*[[bwa-mem2 2016 | bwa-mem2]]/2.0pre1-GCCcore-6.4.0
*[[bwa-mem2 2016 | bwa-mem2]]/2.0pre1-GCCcore-6.4.0
*[[CESAR 2016 | CESAR]]/2.0-intel-2019b_25-08-2020
*[[CESAR 2016 | CESAR]]/2.0-intel-2019b_25-08-2020
*CONCOCT/1.1.0-foss-2019b-Python-3.7.4
*CONCOCT/1.1.0-intel-2019b-Python-3.7.4
*[[Fiji/Unet 2016 | caffe_unet]]/99bd99795d-intel-2016b-Python-2.7.12
*[[Fiji/Unet 2016 | caffe_unet]]/99bd99795d-intel-2016b-Python-2.7.12
*[[canu 2016 | canu]]/1.7-intel-2016b
*[[canu 2016 | canu]]/1.7-intel-2016b
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*[[CESAR 2016 | CESAR]]/2.0-intel-2019b_25-08-2020
*[[CESAR 2016 | CESAR]]/2.0-intel-2019b_25-08-2020
*Centrifuge/1.0.4-iimpi-2019b  
*Centrifuge/1.0.4-iimpi-2019b  
*CheckM/1.1.2-foss-2019b-Python-3.7.4
*CheckM/1.1.2-intel-2019b-Python-3.7.4
*CheckM/1.1.10-foss-2019b-Python-3.7.4
*[[ConnectomeWorkbench 2016 | ConnectomeWorkbench ]]/1.3.2-GCCcore-8.3.0
*[[ConnectomeWorkbench 2016 | ConnectomeWorkbench ]]/1.3.2-GCCcore-8.3.0
*[[ConnectomeWorkbench 2016 | ConnectomeWorkbench ]]/1.5.0-GCCcore-8.3.0
*[[ConnectomeWorkbench 2016 | ConnectomeWorkbench ]]/1.5.0-GCCcore-8.3.0
*[[cutadapt]]/1.9.1
*[[cutadapt]]/1.9.1
*DendroPy/4.5.2-GCCcore-8.3.0
*[[discovardenovo 2016 | discovardenovo]]/52488
*[[discovardenovo 2016 | discovardenovo]]/52488
*DIAMOND/2.0.9-GCC-8.3.0
*DIAMOND/2.0.9-GCC-8.3.0
Line 188: Line 180:
*[[FSL 2016 | FSL]]/6.0.5.1-fosscuda-2019b
*[[FSL 2016 | FSL]]/6.0.5.1-fosscuda-2019b
*[[FSL 2016 | fsl_sub]]/6.0.3-foss-2019b-Python-3.7.4
*[[FSL 2016 | fsl_sub]]/6.0.3-foss-2019b-Python-3.7.4
*[[FSL 2016 | FSL]]/6.0.6.2
*[[GATK]]/3.7-Java-8.112
*[[GATK]]/3.7-Java-8.112
*[[GATK]]/4.1.4.1-GCCcore-8.3.0-Java-8
*[[GATK]]/4.1.4.1-GCCcore-8.3.0-Java-8
Line 220: Line 213:
*[[IGV and IGVTools|IGVTools]]/2.4.19-Java-11
*[[IGV and IGVTools|IGVTools]]/2.4.19-Java-11
*Infernal/1.1.4-GCCcore-8.3.0
*Infernal/1.1.4-GCCcore-8.3.0
*[[illumina-utils 2016 | illumina-utils]]/2.12-foss-2019b-Python-3.7.4
*[[illumina-utils 2016 | illumina-utils]]/2.12-intel-2019b-Python-3.7.4
*[[ipyrad]]/0.9.62-foss-2019b-Python-3.7.4
*[[ipyrad]]/0.9.62-foss-2019b-Python-3.7.4
*[[IsoSeq3 2016 | IsoSeq3]]/3.4.0
*[[IsoSeq3 2016 | IsoSeq3]]/3.4.0
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*[[IQ-TREE 2016 | IQ-TREE]]/2.1.3-foss-2019b
*[[IQ-TREE 2016 | IQ-TREE]]/2.1.3-foss-2019b
*[[IQ-TREE 2016 | IQ-TREE]]/2.1.3-intel-2019b
*[[IQ-TREE 2016 | IQ-TREE]]/2.1.3-intel-2019b
*Jellyfish/1.1.12-intel-2019b
*Jellyfish/2.3.0-GCC-8.3.0
*Jellyfish/2.3.0-GCC-8.3.0
*Kent_tools/401-gompi-2019b
*Kent_tools/401-gompi-2019b
*[[KNIME 2016 | KNIME]]
*[[KNIME 2016 | KNIME]]
*[[Kaldi 2016 | Kaldi]]/5.5-fosscuda-2019b_2021.07
*[[Kaldi 2016 | Kaldi]]/5.5-fosscuda-2019b_2021.07
*[[Kaiju 2016 | Kaiju]]/1.9.2-GCCcore-8.3.0
*kallisto/0.46.1-foss-2019b
*kallisto/0.46.1-foss-2019b
*[[KrakenUniq 2016 | KrakenUniq]]/1.0.3-GCCcore-8.3.0
*[[KrakenUniq 2016 | KrakenUniq]]/1.0.3-gompi-2019b
*[[KrakenUniq 2016 | KrakenUniq]]/1.0.3-intel-2019b
*LACHESIS/2017.12-foss-2019b
*LACHESIS/2017.12-foss-2019b
*[[Lighter]]/1.0
*[[Lighter]]/1.0
Line 247: Line 247:
*[[medaka 2016 | medaka]]/0.10.1-foss-2017b-Python-3.6.3
*[[medaka 2016 | medaka]]/0.10.1-foss-2017b-Python-3.6.3
*MEGAHIT/1.2.9-GCCcore-8.3.0
*MEGAHIT/1.2.9-GCCcore-8.3.0
*MetaBAT/2.15-gompi-2019b
*[[Mindboggle 2016 | Mindboggle]]/1.2.4-foss-2017b-Python-3.6.3
*[[Mindboggle 2016 | Mindboggle]]/1.2.4-foss-2017b-Python-3.6.3
*[[minimap2 2016 | minimap2]]/2.13-foss-2017b
*[[minimap2 2016 | minimap2]]/2.13-foss-2017b
Line 256: Line 257:
*[[MRtrix 2016 | MRtrix]]/3.0.2-intel-2019b-Python-3.7.4
*[[MRtrix 2016 | MRtrix]]/3.0.2-intel-2019b-Python-3.7.4
*[[MultiQC 2016 | MultiQC]]/1.7-intel-2018a-Python-3.6.3
*[[MultiQC 2016 | MultiQC]]/1.7-intel-2018a-Python-3.6.3
*[[MUSCLE 2016 | MUSCLE]]/MUSCLE-3.8.1551-GCC-8.3.0
*[[MUSCLE 2016 | MUSCLE]]/3.8.31-GCC-8.3.0
*[[MUSCLE 2016 | MUSCLE]]/3.8.1551-GCC-8.3.0
*[[MUSCLE 2016 | MUSCLE]]/3.8.1551-GCC-8.3.0
*ncbi-vdb/2.11.2-iimpi-2019b
*ncbi-vdb/2.11.2-iimpi-2019b
*ncbi-genome-download/0.3.1-GCCcore-8.3.0
*[[NextGenMap]]/0.5.2
*[[NextGenMap]]/0.5.2
*[[NextGenMap]]/0.5.5-intel-2016b
*[[NextGenMap]]/0.5.5-intel-2016b
*[[nQuire 2016 | nQuire]]/2018.04-GCCcore-8.3.0
*NSEG/1.0-GCCcore-6.4.0
*NSEG/1.0-GCCcore-6.4.0
*NSEG/1.0-GCCcore-8.3.0
*NSEG/1.0-GCCcore-8.3.0
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*[[Picard 2016 | picard]]/2.22.3-Java-11
*[[Picard 2016 | picard]]/2.22.3-Java-11
*[[Pilon 2016 | Pilon]]/1.23-Java-11
*[[Pilon 2016 | Pilon]]/1.23-Java-11
*pplacer/1.1.alpha19
*[[Pychopper 2016 | Pychopper]]/0.4.0-intel-2018a-Python-3.7.0
*[[Pychopper 2016 | Pychopper]]/0.4.0-intel-2018a-Python-3.7.0
*Pysam/0.15.2-GCC-6.4.0-2.28
*Pysam/0.15.2-GCC-6.4.0-2.28
Line 320: Line 324:
*[[Stacks]]/2.1-intel-2018a
*[[Stacks]]/2.1-intel-2018a
*[[Stacks]]/2.4-intel-2018a
*[[Stacks]]/2.4-intel-2018a
*[[Stacks]]/2.4.1-foss/2017b
*[[Stacks]]/2.4.1-foss-2017b
*[[Stacks]]/2.57-iccifort-2019b
*[[Stacks]]/2.62-foss-2019b
*[[STAR 2016 | STAR]]/2.5.4b-intel-2016b
*[[STAR 2016 | STAR]]/2.5.4b-intel-2016b
*[[STAR 2016 | STAR]]/2.6.1 d-foss-2017b
*[[STAR 2016 | STAR]]/2.6.1 d-foss-2017b
Line 382: Line 388:
*[[OpenFOAM_2016 | OpenFOAM-Plus]]/2006-gimkl-2019b
*[[OpenFOAM_2016 | OpenFOAM-Plus]]/2006-gimkl-2019b
*[[OpenFOAM_2016 | OpenFOAM-Plus]]/2012-gimkl-2019b               
*[[OpenFOAM_2016 | OpenFOAM-Plus]]/2012-gimkl-2019b               
*[[OpenFOAM_2016 | OpenFOAM-Plus]]/2106-gimkl-2019b      
*[[OpenFOAM_2016 | OpenFOAM-Plus]]/2106-gimkl-2019b
*[[OpenFOAM_2016 | OpenFOAM]]/v1912-foss-2019b
*[[OpenFOAM_2016 | OpenFOAM]]/v1912-intel-2019b
*[[OpenFOAM_2016 | OpenFOAM]]/v2112-foss-2019b
*[[OpenFOAM_2016 | OpenFOAM]]/v2112-gomkl-2019b
*[[OpenFOAM_2016 | OpenFOAM]]/v2206-gimkl-2019b
*[[Install PALM on Eddy| PALMDependencies]]/all
*[[Install PALM on Eddy| PALMDependencies]]/all
*[[THETA 2016 | ThetaDependencies]]/all
*[[THETA 2016 | ThetaDependencies]]/all
*UPP/11.0.0-intel-2019b
*[[WRF/WPS 2016 | WPS]]/3.6.1
*[[WRF/WPS 2016 | WPS]]/3.6.1
*[[WRF/WPS 2016 | WPS]]/3.7.1  
*[[WRF/WPS 2016 | WPS]]/3.7.1  
Line 421: Line 433:
*[[CP2K 2016 | CP2K]]/2022.1-intel-2019b-FFTW-MKL-usempi     
*[[CP2K 2016 | CP2K]]/2022.1-intel-2019b-FFTW-MKL-usempi     
*[[CP2K 2016 | CP2K]]/2022.1-intel-2019b-FFTW-MKL
*[[CP2K 2016 | CP2K]]/2022.1-intel-2019b-FFTW-MKL
*dftd3-lib/0.9-iccifort-2019b
*[[Gaussian 2016|gaussian]]/g09.b01     
*[[Gaussian 2016|gaussian]]/g09.b01     
*[[Gaussian 2016|gaussian]]/g09.d01
*[[Gaussian 2016|gaussian]]/g09.d01
Line 488: Line 501:
*[[ANTs 2016 | ANTs]]/2.2.0-foss-2017b-Python-3.6.3
*[[ANTs 2016 | ANTs]]/2.2.0-foss-2017b-Python-3.6.3
*[[ANTs 2016 | ANTs]]/2.2.0-foss-2017b-Python-3.7.0
*[[ANTs 2016 | ANTs]]/2.2.0-foss-2017b-Python-3.7.0
*[[ANTs 2016 | ANTs]]/2.3.2-foss-2019b-Python-3.7.4
*[[ANTs 2016 | ANTs]]/2.3.2-intel-2019b-Python-3.7.4
*Arrow/0.16.0-foss-2019b-Python-3.7.4         
*Arrow/0.16.0-foss-2019b-Python-3.7.4         
*Arrow/6.0.0-foss-2019b               
*Arrow/6.0.0-foss-2019b               
Line 530: Line 545:
*[[HDF5 2016|HDF5]]HDF5/1.12.1-gompic-2022.07
*[[HDF5 2016|HDF5]]HDF5/1.12.1-gompic-2022.07
*[[HDF5 2016|HDF5]]HDF5/1.12.1-gcccuda-2022.07
*[[HDF5 2016|HDF5]]HDF5/1.12.1-gcccuda-2022.07
*hzar/0.2-5-foss-2019b-R-4.1.0
*MariaDB/10.3.10-foss-2017b
*MariaDB/10.3.10-foss-2017b
*MariaDB/10.4.13-gompi-2019b
*MariaDB/10.4.13-gompi-2019b
Line 565: Line 581:
*[[PyTables 2016 | PyTables]]/3.5.1-foss-2017b-Python-3.6.3
*[[PyTables 2016 | PyTables]]/3.5.1-foss-2017b-Python-3.6.3
*pyproj/2.4.2-GCCcore-8.3.0-Python-3.7.4
*pyproj/2.4.2-GCCcore-8.3.0-Python-3.7.4
*python-Levenshtein/0.12.0-foss-2019b-Python-3.7.4
*python-Levenshtein/0.12.2-foss-2019b-Python-3.7.4
*python-Levenshtein/0.12.2-GCCcore-8.3.0-Python-3.7.4
*rgdal/1.5-23-foss-2019b-R-4.1.0
*rgdal/1.5-23-foss-2019b-R-4.1.0
*ROOT/v5.34.36
*ROOT/v5.34.36
Line 572: Line 591:
*ROOT/6.22.06-fosscuda-2019b-Python-3.7.4
*ROOT/6.22.06-fosscuda-2019b-Python-3.7.4
*ROOT/6.24.06-foss-2019b
*ROOT/6.24.06-foss-2019b
*RRBoost/0.1-foss-2019b-R-4.1.0
*[[RStan 2016 | RStan]]/2.19.2-intel-2018a-R-3.6.1
*[[RStan 2016 | RStan]]/2.19.2-intel-2018a-R-3.6.1
*[[SALOME 2016 | SALOME]]/9.7.0-GCCcore-8.3.0-Python-3.7.4
*[[SALOME 2016 | SALOME]]/9.7.0-GCCcore-8.3.0-Python-3.7.4
*scikit-learn/0.23.2-foss-2019b-Python-3.7.4
*scikit-learn/0.23.2-intel-2019b-Python-3.7.4
*scikit-learn/0.23.2-intel-2019b-Python-3.7.4
*scikit-learn/0.23.2-fosscuda-2019b-Python-3.7.4
*scikit-learn/0.23.2-fosscuda-2019b-Python-3.7.4
Line 692: Line 713:
*protobuf/3.17.3-GCCcore-8.3.0.eb
*protobuf/3.17.3-GCCcore-8.3.0.eb
*pkg-config/0.29.1-gimpi-6.2016
*pkg-config/0.29.1-gimpi-6.2016
*pkgconf/1.8.0-GCCcore-8.3.0
*pkgconfig/1.2.2-intel-2018a-Python-3.6.3
*pkgconfig/1.2.2-intel-2018a-Python-3.6.3
*pkgconfig/1.5.1-foss-2017b-Python-3.6.3
*pkgconfig/1.5.1-foss-2017b-Python-3.6.3
Line 707: Line 729:
*[[ PyTorch 2016 | PyTorch ]]/1.9.0-fosscuda-2019b-Python-3.7.4
*[[ PyTorch 2016 | PyTorch ]]/1.9.0-fosscuda-2019b-Python-3.7.4
*[[ PyTorch 2016 | PyTorch ]]/1.11.0-gcccuda-2021.06-conda
*[[ PyTorch 2016 | PyTorch ]]/1.11.0-gcccuda-2021.06-conda
*[[ PyTorch 2016 | PyTorch ]]/1.13.1-conda
*SCons/3.0.5-intel-2018a-Python-3.6.3
*SCons/3.0.5-intel-2018a-Python-3.6.3
*sparsehash/2.0.3-GCCcore-6.4.0
*sparsehash/2.0.3-GCCcore-6.4.0
Line 764: Line 787:
*[[Julia 2016 | Julia]]/1.0.5-LTS-linux-x86_64
*[[Julia 2016 | Julia]]/1.0.5-LTS-linux-x86_64
*[[Julia 2016 | Julia]]/1.6.1-linux-x86_64
*[[Julia 2016 | Julia]]/1.6.1-linux-x86_64
*[[Julia 2016 | Julia]]/1.6.7-LTS-linux-x86_64
*[[Julia 2016 | Julia]]/1.8.5-linux-x86_64
*[[Lua 2016 | Lua]]/5.1.5-GCCcore-8.3.0
*[[Lua 2016 | Lua]]/5.1.5-GCCcore-8.3.0
*[[Lua 2016 | Lua]]/5.3.5-GCCcore-8.3.0
*[[Lua 2016 | Lua]]/5.3.5-GCCcore-8.3.0
Line 793: Line 818:
*[[R 2016| R]]/4.0.2-foss-2019b
*[[R 2016| R]]/4.0.2-foss-2019b
*[[R 2016| R]]/4.0.2-foss-2019b-2021.06
*[[R 2016| R]]/4.0.2-foss-2019b-2021.06
*[[R 2016| R-core]]4.1.0-foss-2019b
*[[R 2016| R-core]]4.2.2-intel-2019b
*Rbundle4anvio/2022.11-intel-2019b-R-4.2.2
*[[RStudio 2016 | RStudio]]/1.2.5019-intel-2018a
*[[RStudio 2016 | RStudio]]/1.2.5019-intel-2018a
*[[RStudio 2016 | RStudio]]/1.4.1106-foss-2019b-Java-11-R-4.0.2
*[[RStudio 2016 | RStudio]]/1.4.1106-foss-2019b-Java-11-R-4.0.2
Line 851: Line 879:
*libffi/3.2.1-gimpi-6.2016
*libffi/3.2.1-gimpi-6.2016
*libfabric/1.11.0-GCCcore-8.3.0
*libfabric/1.11.0-GCCcore-8.3.0
*libgd/2.2.5-GCCcore-8.3.0
*libglade/2.6.4-intel-2016b
*libglade/2.6.4-intel-2016b
*libglade/2.6.4-intel-2019b
*libglade/2.6.4-intel-2019b
Line 896: Line 925:
mpi4py/3.0.3-iimpi-2019b                             
mpi4py/3.0.3-iimpi-2019b                             
*mysqlclient/1.4.2-foss-2017b-Python-2.7.14
*mysqlclient/1.4.2-foss-2017b-Python-2.7.14
*NCEPLIBS-bacio/2.5.0-intel-2019b
*NCEPLIBS-g2/3.4.5-intel-2019b
*NCEPLIBS-g2c/1.7.0-intel-2019b
*NCEPLIBS-g2tmpl/1.10.2-intel-2019b
*NCEPLIBS-sp/2.3.3-intel-2019b
*NCCL/2.4.8-gcccuda-2019b
*NCCL/2.4.8-gcccuda-2019b
*NCCL/2.11.4-gcccuda-2022.07
*NCCL/2.11.4-gcccuda-2022.07
Line 917: Line 951:
*PyYAML/3.13-foss-2017b-Python-3.6.3
*PyYAML/3.13-foss-2017b-Python-3.6.3
*PyYAML/5.1-foss-2017b-Python-2.7.14
*PyYAML/5.1-foss-2017b-Python-2.7.14
*PyYAML/5.4.1-GCCcore-8.3.0
*PyYAML/6.0-GCCcore-8.3.0
*RapidJSON/1.1.0-GCCcore-8.3.0
*RapidJSON/1.1.0-GCCcore-8.3.0
*RE2/2020-07-01-GCCcore-8.3.0
*RE2/2020-07-01-GCCcore-8.3.0
Line 954: Line 990:
*zstd/1.5.0-GCCcore-8.3.0
*zstd/1.5.0-GCCcore-8.3.0
*zstd/1.5.2-GCCcore-8.3.0
*zstd/1.5.2-GCCcore-8.3.0
*zstd/1.5.4-GCCcore-8.3.0


===/cm/shared/uniol/modules/math===
===/cm/shared/uniol/modules/math===
*biomod2/3.4.6-foss-2019b-R-4.0.2
*biomod2/3.4.6-foss-2019b-R-4.0.2
*dReal/4.21.06.1-Singularity
*Eigen/3.2.9-gimpi-6.2016
*Eigen/3.2.9-gimpi-6.2016
*Eigen/3.3.7
*Eigen/3.3.7
Line 962: Line 1,000:
*ELPA/2019.11.001-intel-2019b
*ELPA/2019.11.001-intel-2019b
*ELPA/2020.11.001-foss-2019b
*ELPA/2020.11.001-foss-2019b
*ELSI/2.7.1-intel-2019b-PEXSI
*[[bgc 2016 | bgc]]/1.03-intel-2018a
*[[bgc 2016 | bgc]]/1.03-intel-2018a
*GEOS/3.8.0-GCC-8.3.0-Python-3.7.4
*GEOS/3.8.0-GCC-8.3.0-Python-3.7.4
Line 967: Line 1,006:
*GMP/6.1.0-intel-2016b   
*GMP/6.1.0-intel-2016b   
*GMP/6.1.1
*GMP/6.1.1
*[[KaHIP 2016 | KaHIP]]/3.14-gimkl-2019b
*[[KaHIP 2016 | KaHIP]]/3.14-gompi-2019b
*[[Keras 2016 | Keras ]]/2.1.5-intel-2018a-Python-3.6.3
*[[Keras 2016 | Keras ]]/2.1.5-intel-2018a-Python-3.6.3
*[[Keras 2016 | Keras ]]/2.2.4-foss-2017b-Python-3.6.3
*[[Keras 2016 | Keras ]]/2.2.4-foss-2017b-Python-3.6.3
Line 981: Line 1,022:
*[[NEURON 2016 | NEURON]]/7.5-intel-2016b
*[[NEURON 2016 | NEURON]]/7.5-intel-2016b
*[[NEURON 2016 | NEURON]]/7.6.2-intel-2018a
*[[NEURON 2016 | NEURON]]/7.6.2-intel-2018a
*NTPoly/2.7.0-intel-2019b
*numexpr/2.6.5-foss-2017b-Python-3.6.3
*numexpr/2.6.5-foss-2017b-Python-3.6.3
*ParMETIS/4.0.3-foss-2019b
*ParMETIS/4.0.3-foss-2019b
Line 991: Line 1,033:
*SCOTCH/6.0.9-gompi-2019b
*SCOTCH/6.0.9-gompi-2019b
*SCOTCH/6.0.9-iimpi-2019b  
*SCOTCH/6.0.9-iimpi-2019b  
*SCOTCH/7.0.1-gimkl-2019b
*SCOTCH/7.0.1-gompi-2019b
*Shapely/1.7.0-GCC-8.3.0-Python-3.7.4
*Shapely/1.7.0-GCC-8.3.0-Python-3.7.4
*statsmodels/0.13.2-foss-2019b
*statsmodels/0.13.2-foss-2019b
Line 1,122: Line 1,166:
*[[Octopus 2016 | Octopus]]/10.3-foss-2019b
*[[Octopus 2016 | Octopus]]/10.3-foss-2019b
*[[OpenFAST 2016 | OpenFAST]]/3.1.0-intel-2019b
*[[OpenFAST 2016 | OpenFAST]]/3.1.0-intel-2019b
*[[OpenFAST 2016 | OpenFAST]]/3.3.0-intel-2019b
*[[PVMOS 2016 | PVMOS]]/0.48
*[[PVMOS 2016 | PVMOS]]/0.48
*[[SCUFF-EM 2016 | SCUFF-EM]]/0.96-intel-2018a
*[[SCUFF-EM 2016 | SCUFF-EM]]/0.96-intel-2018a
Line 1,172: Line 1,217:
===/cm/shared/uniol/modules/tools===
===/cm/shared/uniol/modules/tools===
*ansys/18.0
*ansys/18.0
*awscli/1.27.64-GCCcore-8.3.0-Python-3.7.4
*bzip2/1.0.6-gimpi-6.2016
*bzip2/1.0.6-gimpi-6.2016
*bokeh/1.4.0-fosscuda-2019b-Python-3.7.4
*bokeh/1.4.0-fosscuda-2019b-Python-3.7.4
Line 1,177: Line 1,223:
*behave/1.2.7.dev2-intel-2019b-Python-3.7.4
*behave/1.2.7.dev2-intel-2019b-Python-3.7.4
*configurable-http-proxy/1.3.0-intel-2016b-nodejs-4.4.7
*configurable-http-proxy/1.3.0-intel-2016b-nodejs-4.4.7
*CONN/20a-MATLAB-2020a
*DB/18.1.32-GCCcore-8.3.0
*DB/18.1.32-GCCcore-8.3.0
*EasyBuild/3.0.0   
*EasyBuild/3.0.0   
Line 1,230: Line 1,277:
*[[Singularity 2016 | Singularity]]/2.6.1-GCCcore-6.4.0
*[[Singularity 2016 | Singularity]]/2.6.1-GCCcore-6.4.0
*[[ Spyder 2016 | Spyder]]/5.0.0a2-foss-2019b-Python-3.7.4
*[[ Spyder 2016 | Spyder]]/5.0.0a2-foss-2019b-Python-3.7.4
*SPM/12.5_r7771-MATLAB-2020a
*UnZip/6.0-GCCcore-8.3.0
*UnZip/6.0-GCCcore-8.3.0
*util-linux/2.29-intel-2016b
*util-linux/2.29-intel-2016b
Line 1,237: Line 1,285:
*XZ/5.2.2-gimpi-6.2016
*XZ/5.2.2-gimpi-6.2016
*XZ/5.2.2-intel-2016b
*XZ/5.2.2-intel-2016b
*yaml-cpp/0.6.3-GCCcore-8.3.0


===/cm/shared/uniol/modules/vis===
===/cm/shared/uniol/modules/vis===
Line 1,278: Line 1,327:
*GLib/2.62.0-GCCcore-8.3.0
*GLib/2.62.0-GCCcore-8.3.0
*Graphviz/2.49.0-GCCcore-8.3.0-Java-11
*Graphviz/2.49.0-GCCcore-8.3.0-Java-11
*Graphviz/5.0.0-GCCcore-8.3.0-Python-3.7.4
*GraphicsMagick/1.3.25-intel-2016b  
*GraphicsMagick/1.3.25-intel-2016b  
*GTK+/2.24.3-intel-2016b
*GTK+/2.24.3-intel-2016b
Line 1,287: Line 1,337:
*[[ImageMagic 2016 | ImageMagic]]/7.0.8-46-GCCcore-6.4.0
*[[ImageMagic 2016 | ImageMagic]]/7.0.8-46-GCCcore-6.4.0
*[[ImageMagic 2016 | ImageMagic]]/7.0.9-5-GCCcore-8.3.0
*[[ImageMagic 2016 | ImageMagic]]/7.0.9-5-GCCcore-8.3.0
*inputproto/2.3-goolf-5.2.01  
*inputproto/2.3-goolf-5.2.01
*JasPer/2.0.14-GCCcore-8.3.0
*JasPer/2.0.33-GCCcore-8.3.0
*kbproto/1.0.6-goolf-5.2.01
*kbproto/1.0.6-goolf-5.2.01
*libGLU/9.0.1-GCCcore-8.3.0
*libGLU/9.0.1-GCCcore-8.3.0
Line 1,360: Line 1,412:
*VTK/8.1.1-foss-2017b-Python-2.7.14
*VTK/8.1.1-foss-2017b-Python-2.7.14
*VTK/8.2.0-foss-2019b-Python-3.7.4
*VTK/8.2.0-foss-2019b-Python-3.7.4
*VTK/8.2.0-intel-2019b-Python-3.7.4
*VTK/9.0.1-fosscuda-2019b-Python-3.7.4
*VTK/9.0.1-fosscuda-2019b-Python-3.7.4
*VTK/9.0.1-fosscuda-2019b_master  (more recent than 9.0.1 & bug-fixed)
*VTK/9.0.1-fosscuda-2019b_master  (more recent than 9.0.1 & bug-fixed)
*VTK/9.0.1-fosscuda-2019b-Qt5
*VTK/9.0.3-fosscuda-2019b-Qt5
*VTK/9.0.3-fosscuda-2019b-Qt5
*X11/20160819-goolf-5.2.01
*X11/20160819-goolf-5.2.01

Latest revision as of 10:10, 27 April 2023

Introduction

This page was created to give you an overview of the installed software on the cluster (name/version). The list will be updated at least once per week.

If you find a program in this list, but can't find it on the cluster (for example when looking at the output of the command module avail) it has most likely been hidden. Its also possible that a module isn't listed here for the same reason. You can find every hidden module here: /cm/shared/uniol/modules/.hidden. If you want to access a hidden module, you have to add a "." in front of the version number, e.g.:

[abcd1234@hpcl001 ~]$ module load PCRE/8.39-intel-2016b
Lmod has detected the following error:  The following module(s) are unknown: "PCRE/8.39-intel-2016b"

Please also double check spelling and the version number you typed in. Also try "module spider <name>" to include every software package on all environents. 
After loading the desired software module you can check all currently loaded modules with "ml": [abcd1234@hpcl001 ~]$ module load PCRE/.8.39-intel-2016b [abcd1234@hpcl001 ~]$ ml Currently Loaded Modules: 1) hpc-uniol-env 3) icc/2016.3.210 5) binutils/.2.26-GCCcore-5.4.0 7) impi/5.1.3.210 9) imkl/11.3.3.210 11) PCRE/.8.39-intel-2016b 2) slurm/current 4) GCCcore/.5.4.0 6) ifort/2016.3.210 8) iimpi/2016b 10) intel/2016b

Latest installed programs and version updates

To keep you up to date, all newly installed programs and version updates of the last two to three months (ca.) are listed in this section. Since early 2020, every new program is installed in the new environment hpc-env/8.3.


Software Version Toolchain Install Date (D/M/Y)
ncbi-genome-download 0.3.1 GCCcore/8.3.0 27/04/2023
illumina-utils 2.12 intel/2019b 15/03/2023
KrakenUniq 1.0.3 GCCcore, intel & gompi 14/03/2023
KaHIP 3.14 gimkl & gompi 06/03/2023
Kaiju 1.9.2 GCCcore/8.3.0 28/02/2023
FSL 6.0.6.2 SYSTEM 21/02/2023
PyTorch 1.13.1 conda 17/02/2023
OpenFOAM v2112 gimkl/2019b & foss/2019b 14/02/2023
CONCOCT 1.1.0 foss/2019b 07/2023
Julia 1.8.5 & 1.6.7-LTS SYSTEM 03/02/2023
CheckM 1.1.10 foss/2019b 03/02/2023
MetaBAT 2.15 gompi/2019b 03/02/2023

Installed Software

/cm/local/modulefiles

  • cluster-tools/7.3
  • cmd
  • dot
  • freeipmi/1.5.2
  • gcc/6.1.0
  • ipmitool/1.8.17
  • module-git
  • module-info
  • openldap
  • shared

/cm/shared/uniol/modules/core

  • hpc-uniol-env (L)
  • slurm/current (L)

/cm/shared/uniol/modules/bio

/cm/shared/uniol/modules/cfd

/cm/shared/uniol/modules/chem

  • AIMAll/19.10.12-intel-2019b-linux_64bit
  • CP2K/3.0
  • CP2K/5.1
  • CP2K/7.1-intel-2019b
  • CP2K/8.2-gomkl-2019b
  • CP2K/9.1-conda
  • CP2K9.1-gomkl-2019b
  • CP2K9.1-intel-2019b
  • CP2K/2022.1-intel-2019b
  • CP2K/2022.1-intel-2019b-FFTW-MKL-usempi
  • CP2K/2022.1-intel-2019b-FFTW-MKL
  • dftd3-lib/0.9-iccifort-2019b
  • gaussian/g09.b01
  • gaussian/g09.d01
  • gaussian/g16.a03
  • Libint/2.4.2-gompi-2019b
  • Libint/2.4.2-iimpi-2019b
  • Libint/2.5.0-gompi-2019b
  • Libint/2.5.0-iimpi-2019b
  • Libint/2.6.0-gompi-2019b
  • Libint/2.6.0-iimpi-2019b
  • Libint/2.6.0-gomkl-2019b-lmax-6-cp2k
  • libvori/210412-GCCcore-8.3.0
  • libvori/220621-GCCcore-8.3.0
  • libxc/4.3.4-GCC-8.3.0
  • libxc/4.3.4-gompi-2019b
  • libxc/4.3.4-iccifort-2019b
  • libxc/5.0.0.a-gompi-2019b
  • MOLGW/2.A-foss-2019b
  • MOLGW/2.D-intel-2019b
  • MOLGW/2.D-intel-2019b-mpi
  • NAMD/2.12
  • NAMD/2.14-fosscuda-2019b
  • NAMD/2.15alpha1_2021-07-22-fosscuda-2019b
  • NAMD/3.0alpha8-fosscuda-2019b-multicore-CUDA-SingleNode
  • NAMD/3.0alpha8-fosscuda-2019b-netlrts-smp-CUDA-SingleNode
  • NBO 2016/6.0
  • ORCA/3.0.3
  • ORCA/4.0.0
  • ORCA/4.0.1.2
  • pDynamo/1.9.0
  • PLUMED/2.2.3
  • QuantumESPRESSO/6.6-intel-2019b
  • QuantumESPRESSO/6.7-iomkl-2019b

/cm/shared/uniol/modules/compiler

  • Clang/9.0.1-GCC-8.3.0-CUDA-10.1.243
  • CUDA-Toolkit/8.0.44
  • CUDA-Toolkit/recent
  • GCC/4.9.4-2.25
  • GCC/5.4.0-2.26
  • GCC/6.2.0-2.27 (D)
  • Go/1.11.5
  • Go/1.14
  • Go/1.17.6
  • LLVM/3.8.1-goolf-5.2.01
  • LLVM/3.8.1-intel-2016b
  • LLVM/3.8.1-gimpi-6.2016
  • LLVM/3.9.0-intel-2016b
  • LLVM/5.0.0-foss-2017b
  • LLVM/5.0.0-GCCcore-6.4.0
  • LLVM/6.0.0-GCCcore-6.4.0
  • LLVM/7.0.0-GCCcore-6.4.0 (D)
  • LLVM/8.0.1-GCCcore-6.4.0
  • NAG_Fortran/5.2
  • NVHPC /21.3-gcccuda-2021.06
  • NVHPC /21.9-intelcuda-2022.01
  • PGI/12.10
  • PGI/15.10
  • PGI/16.10
  • PGI/19.10-GCC-8.3.0
  • icc/2016.3.210
  • ifort/2016.3.210

/cm/shared/uniol/modules/data

  • AMICO/1.2.9-intel-2019b-Python-3.7.4
  • ANTs/2.2.0-foss-2017b-Python-2.7.14
  • ANTs/2.2.0-foss-2017b-Python-3.6.3
  • ANTs/2.2.0-foss-2017b-Python-3.7.0
  • ANTs/2.3.2-foss-2019b-Python-3.7.4
  • ANTs/2.3.2-intel-2019b-Python-3.7.4
  • Arrow/0.16.0-foss-2019b-Python-3.7.4
  • Arrow/6.0.0-foss-2019b
  • CDO/1.7.2-intel-2016b
  • concaveman/1.0.0-intel-2018a-R-3.6.1
  • dakota/6.10.0
  • dask/2.8.0-fosscuda-2019b-Python-3.7.4
  • DBD-Pg/3.14.2-foss-2019b-Perl-5.30.0
  • DB_File/1.835-GCCcore-8.3.0
  • detectron2/0.3-fosscuda-2019b-Python-3.7.4
  • Deriv/4.1.3-foss-2019b-R-4.1.0
  • dill/0.3.3-GCCcore-8.3.0
  • dmipy/1.0.5-foss-2019b-Python-3.7.4
  • File-Which/1.27-GCCcore-8.3.0
  • Fiona/1.8.13-foss-2019b-Python-3.7.4
  • Fiona/1.8.13-fosscuda-2019b-Python-3.7.4
  • GDAL/3.0.2-foss-2019b-Python-3.7.4
  • GDAL/3.0.2-fosscuda-2019b-Python-3.7.4
  • h5py/2.7.1-intel-2018a-Python-3.6.3
  • h5py/2.8.0-foss-2017b-Python-3.6.3
  • h5py/2.9.0-fosscuda-2019b-Python-3.7.4
  • h5py/2.10.0-foss-2019b-Python-3.7.4
  • h5py/2.10.0-fosscuda-2019b-Python-3.7.4
  • h5py/2.10.0-fosscuda-2022.07-Python-3.7.4
  • HDF/4.2.11-intel-2016b
  • HDF/4.2.12-gimkl-7.2017.3
  • HDF/4.2.12-goolf-7.2.11
  • HDF5/1.8.17-intel-2016b
  • HDF5/1.10.1-foss-2017b
  • HDF5/1.10.1-intel-2018a
  • HDF5/1.10.2-gimkl-2018a
  • HDF5/1.10.2-intel-2018a
  • HDF5/1.10.5-intel-2018a
  • HDF5/1.10.5-gompi-2019b
  • HDF5/1.10.5-gompic-2019b
  • HDF5/1.10.5-iimpi-2019b
  • HDF5HDF5/1.10.7-gompic-2022.07
  • HDF5/1.12.0-iomkl-2019b
  • HDF5/1.12.1-gcccuda-2021.06
  • HDF5/1.12.1-iomkl-2019b
  • HDF5/1.12.1-iimpi-2019b
  • HDF5HDF5/1.12.1-gompic-2022.07
  • HDF5HDF5/1.12.1-gcccuda-2022.07
  • hzar/0.2-5-foss-2019b-R-4.1.0
  • MariaDB/10.3.10-foss-2017b
  • MariaDB/10.4.13-gompi-2019b
  • merra2wrf/2.0
  • NCL/6.3.0-intel-2016b
  • g2clib/1.4.0-intel-2016b
  • g2lib/1.4.0-intel-2016b
  • geopandas/0.8.1-foss-2019b-Python-3.7.4
  • geopandas/0.8.1-fosscuda-2019b-Python-3.7.4
  • grib_api/1.16.0-intel-2016b
  • ITK /4.13.1-foss-2017b-Python-2.7.14
  • ITK /4.13.2-foss-2017b-Python-3.6.3
  • ITK /4.13.2-foss-2017b-Python-3.7.0
  • ITK /5.0.1-foss-2019b-Python-3.7.4
  • netCDF/4.4.1-intel-2016b
  • netCDF/4.4.1-intel-2016b-with-HDF4
  • netCDF-Fortran/4.4.4-intel-2016b
  • netCDF-Fortran/4.4.4-intel-2016b-with-HDF4
  • netCDF/4.6.1-gimkl-2018a
  • netCDF/4.6.1-intel-2018a
  • netCDF4.7.1-gompi-2019b
  • netCDF4.7.1-gompic-2019b
  • netCDF4.7.1-iimpi-2019b
  • netCDF/4.8.0-gompi-2019b
  • netCDF-Fortran/4.4.4-intel-2018a
  • netCDF-Fortran4.5.2-gompi-2019b
  • netCDF-Fortran/4.5.2-iimpi-2019b
  • netCDF-C++/4.3.0-intel-2018a
  • osrm-backend/5.25.0-foss-2019b
  • osrm/3.4.1-foss-2019b-R-4.1.0-2021.06
  • Osmium-Tool/1.14.0-foss-2019b-Python-3.7.4
  • ParallelIO/2.5.2-intel-2019b
  • PostgreSQL/12.6-GCCcore-8.3.0
  • PyTables/3.5.1-foss-2017b-Python-2.7.14
  • PyTables/3.5.1-foss-2017b-Python-3.6.3
  • pyproj/2.4.2-GCCcore-8.3.0-Python-3.7.4
  • python-Levenshtein/0.12.0-foss-2019b-Python-3.7.4
  • python-Levenshtein/0.12.2-foss-2019b-Python-3.7.4
  • python-Levenshtein/0.12.2-GCCcore-8.3.0-Python-3.7.4
  • rgdal/1.5-23-foss-2019b-R-4.1.0
  • ROOT/v5.34.36
  • ROOT/v6.08.02
  • ROOT/6.20.04-foss-2019b-Python-3.7.4
  • ROOT/6.22.06-foss-2019b-Python-3.7.4
  • ROOT/6.22.06-fosscuda-2019b-Python-3.7.4
  • ROOT/6.24.06-foss-2019b
  • RRBoost/0.1-foss-2019b-R-4.1.0
  • RStan/2.19.2-intel-2018a-R-3.6.1
  • SALOME/9.7.0-GCCcore-8.3.0-Python-3.7.4
  • scikit-learn/0.23.2-foss-2019b-Python-3.7.4
  • scikit-learn/0.23.2-intel-2019b-Python-3.7.4
  • scikit-learn/0.23.2-fosscuda-2019b-Python-3.7.4
  • XML-LibXML/2.0206-GCCcore-8.3.0

/cm/shared/uniol/modules/devel

  • Advisor/2019.2
  • ALE/0.6.0-GCCcore-6.4.0
  • Autoconf/2.69-gimpi-6.2016
  • Autoconf/2.69-gimpi-6.2016
  • Automake/1.15
  • Automake/1.16.1-GCCcore-6.4.0
  • Automake/1.16.2-GCCcore-8.3.0
  • Autotools/20150215
  • Autotools/20150215-gimpi-6.2016
  • Autotools/20170619-GCCcore-6.4.0
  • Autotools/20180311-GCCcore-6.4.0
  • Autotools/20180311-GCCcore-8.3.0
  • Autotools/20200321-GCCcore-8.3.0
  • ant/1.10.1-Java-1.8.0_172
  • ant-1.10.7-Java-11
  • Bazel/0.11.1-GCCcore-6.4.0
  • Bazel/0.20.0-GCCcore-6.4.0
  • Bazel/0.20.0-GCCcore-8.3.0
  • Bazel/0.26.1-foss-2017b-Python-3.6.3
  • Bazel/0.29.1-foss-2017b-Python-3.6.3
  • Bazel/0.29.1-GCCcore-8.3.0
  • Boost/1.61.0-gimpi-6.2016
  • Boost/1.61.0-goolf-5.2.01
  • Boost/1.61.0-intel-2016b
  • Boost/1.63.0-intel-2018a
  • Boost/1.64.0-intel-2017a
  • Boost/1.65.1-foss-2017b-Python-3.6.3
  • Boost/1.66.0-intel-2018a
  • Boost/1.67.0-foss-2017b-Python-2.7.14
  • Boost/1.71.0-iimpi-2018a
  • Boost/1.71.0-intel-2018a-Python-2.7.14
  • Boost/1.71.0-gompi-2019b
  • Boost/1.72.0-gimkl-2019b
  • Boost/1.72.0-gompi-2019b
  • Boost/1.72.0-iimpi-2019b
  • Boost/1.74.0-GCC-8.3.0
  • Boost.Python/1.64.0-gompi-2019b
  • Boost.Python/1.71.0-iimpi-2019b
  • Boost.Python/1.71.0-gompi-2019b
  • Boost.Python/1.72.0-gompi-2019b
  • Boost.Python/1.72.0-iimpi-2019b
  • catkin/0.7.14-foss-2017b-Python-2.7.14
  • catkin-dep/1.0-foss-2017b-Python-2.7.14
  • CMake/2.8.12
  • CMake/3.6.2 (D)
  • CMake/3.5.2-gimpi-6.2016
  • CMake/3.6.1-gimpi-6.2016
  • CMake/3.9.1-GCCcore-6.4.0
  • CMake/3.9.5-GCCcore-6.4.0
  • CMake/3.12.1-GCCcore-6.4.0
  • CMake/3.13.3-GCCcore-6.4.0
  • CMake/3.15.2-GCCcore-6.4.0
  • CMake/3.9.6
  • CMake/3.15.3-GCCcore-8.3.0
  • CMake/3.18.4
  • CMake/3.22.1-GCCcore-8.3.0
  • CUDA-Profiler/8.0.44
  • CUDA-Visual-Profiler/8.0.44
  • Cube/4.3.4
  • flatbuffers/1.12.0-GCCcore-8.3.0
  • flatbuffers-python/1.12-GCCcore-8.3.0-Python-3.7.4
  • GObject-Introspection/1.52.0-intel-2016b
  • GObject-Introspection/1.58.3-GCCcore-8.3.0-Python-2.7.16
  • GObject-Introspection/1.63.1-GCCcore-8.3.0-Python-3.7.4
  • gflags/2.2.2-GCCcore-6.4.0
  • glog/0.4.0-GCCcore-6.4.0
  • glew/2.1.0-GCCcore-8.3.0
  • glew/2.1.0-fosscuda-2019b
  • gtest/1.8.0-GCCcore-6.4.0
  • googletest/1.10.0-GCCcore-8.3.0
  • intltool/0.51.0-foss-2017b-Perl-5.26.0
  • intltool/0.51.0-GCCcore-6.4.0-Perl-5.26.0
  • intltool/0.51.0-intel-2018a-Perl-5.26.0
  • intltool/0.51.0-intel-2018a-Perl-5.28.0
  • intltool/0.51.0-intel-2018a
  • LevelDB/1.22-GCCcore-6.4.0
  • libXmu/1.1.2-goolf-5.2.01
  • libosmium/2.18.0-foss-2019b-Python-3.7.4
  • libsigc++/2.10.2-GCCcore-8.3.0
  • libsigc++/3.0.3-GCCcore-8.3.0
  • LZO/2.10-foss-2017b
  • LZO/2.10-GCCcore-8.3.0
  • M4/1.4.17
  • M4/1.4.17-gimpi-6.2016
  • Mako/1.0.4-gimpi-6.2016-Python-2.7.12
  • Mako/1.0.7-foss-2017b-Python-3.6.3
  • Mako/1.0.7-intel-2018a-Python-2.7.14
  • Mako/1.0.8-intel-2018a-Python-2.7.14
  • Mako/1.0.8-intel-2018a-Python-3.7.0
  • Mako/1.1.0-GCCcore-8.3.0
  • makedepend/1.0.6
  • makedepend/1.0.6-GCCcore-8.3.0
  • ncurses/6.0
  • ncurses/6.0-gimpi-6.2016
  • Nvidia-Tesla-GDK/352.79
  • nsync/1.24.0-GCCcore-8.3.0
  • OTF2/2.0
  • PCRE/8.40
  • PCRE2/10.33-GCCcore-6.4.0
  • PCRE2/10.33-GCCcore-8.3.0
  • protobuf-python/3.4.0-intel-2018a-Python-2.7.14
  • protobuf-python/3.4.0-intel-2018a-Python-3.6.3
  • protobuf-python/3.10.0-fosscuda-2019b-Python-3.7.4
  • protobuf-python/3.17.3-GCCcore-8.3.0
  • protobuf-python/3.17.3-fosscuda-2019b-Python-3.7.4
  • protobuf-python/3.17.3-fosscuda-2022.07-Python-3.7.4
  • protobuf/3.4.0-intel-2018a
  • protobuf/3.7.1-GCCcore-6.4.0
  • protobuf/3.6.1.2-GCCcore-8.3.0
  • protobuf/3.9.2-GCCcore-8.3.0
  • protobuf/3.10.0-GCCcore-8.3.0
  • protobuf/3.17.3-GCCcore-8.3.0.eb
  • pkg-config/0.29.1-gimpi-6.2016
  • pkgconf/1.8.0-GCCcore-8.3.0
  • pkgconfig/1.2.2-intel-2018a-Python-3.6.3
  • pkgconfig/1.5.1-foss-2017b-Python-3.6.3
  • pkgconfig/1.5.1-GCCcore-8.3.0-Python-3.7.4
  • Qt/4.8.7-goolf-5.2.01
  • Qt/4.8.7-intel-2016b
  • Qt5/5.8.0-GCCcore-6.4.0
  • Qt5/5.12.1-foss-2017b
  • Qt5/5.13.1-GCCcore-6.4.0
  • ROS/1.14.4-foss-2017b-Python-2.7.14
  • PyTorch /1.0.1-foss-2017b-Python-3.6.3
  • PyTorch /1.4.0-fosscuda-2019b-Python-3.7.4
  • PyTorch /1.6.0-fosscuda-2019b-Python-3.7.4
  • PyTorch /1.7.0-fosscuda-2019b-Python-3.7.4
  • PyTorch /1.9.0-fosscuda-2019b-Python-3.7.4
  • PyTorch /1.11.0-gcccuda-2021.06-conda
  • PyTorch /1.13.1-conda
  • SCons/3.0.5-intel-2018a-Python-3.6.3
  • sparsehash/2.0.3-GCCcore-6.4.0
  • sparsehash/2.0.3-GCCcore-8.3.0
  • Spark/3.2.1-foss-2019b
  • SQLite/3.9.2-intel-2016b
  • SQLite/3.13.0-goolf-5.2.01
  • SQLite/3.13.0-intel-2016b
  • SQLite/3.19.3
  • SQLite/3.20.1-GCCcore-6.4.0
  • SQLite/3.23.0-intel-2018a
  • SQLite/3.28.0-GCCcore-6.4.0
  • SQLite/3.23.0-GCCcore-8.3.0
  • SQLite/3.29.0-GCCcore-8.3.0
  • SQLite/3.35.4-GCCcore-8.3.0
  • Spark/2.4.0-intel-2018a-Hadoop-2.7
  • SWIG/3.0.8-intel-2016b-Python-2.7.12
  • SWIG/3.0.12-Python-3.6.1
  • SWIG/4.0.1-GCCcore-8.3.0
  • Scalasca/2.3
  • Valgrind/3.12.0
  • Valgrind/3.18.1-iimpi-2019b
  • xbitmaps/1.1.1
  • xcb-proto/1.7-goolf-5.2.01-Python-2.7.3
  • xextproto/7.2.1-goolf-5.2.01
  • xproto/7.0.23-goolf-5.2.01
  • xproto/7.0.31-GCCcore-8.3.0
  • xproto/7.0.31
  • xtrans/1.2-goolf-5.2.01
  • xorg-macros/1.19.0

/cm/shared/uniol/modules/lang

  • Anaconda3/4.3.0
  • Anaconda3/5.1.0
  • Anaconda3/5.3.0
  • Anaconda3/2020.11
  • Anaconda3/2021.05
  • Anaconda3/2021.11
  • Bison/3.0.4
  • Bison/3.3.2
  • Bison/3.5.3
  • Bison/3.0.4-gimpi-6.2016
  • Bison/3.3.2-GCCcore-8.3.0
  • Bison/3.6.1-GCCcore-8.3.0
  • Gurobi/7.0.2
  • Gurobi/9.1.2
  • Gurobi/9.5.2
  • flex/2.6.0-gimpi-6.2016
  • flex/2.6.4-GCCcore-6.4.0
  • Java/8.112
  • Java/1.8
  • Java-1.8.0_231
  • Java/1.8.0_172
  • Java/1.8.0_192
  • Java/11.0.2
  • Julia/1.0.1-intel-2018a-Perl-5.28.0
  • Julia/1.0.5-LTS-linux-x86_64
  • Julia/1.6.1-linux-x86_64
  • Julia/1.6.7-LTS-linux-x86_64
  • Julia/1.8.5-linux-x86_64
  • Lua/5.1.5-GCCcore-8.3.0
  • Lua/5.3.5-GCCcore-8.3.0
  • Miniconda3/4.9.2
  • Miniconda3/4.11.0
  • nodejs/4.4.7-intel-2016b
  • nodejs/10.15.3-GCCcore-6.4.0
  • nodejs/12.16.1-GCCcore-8.3.0
  • numba/0.47.0-foss-2019b-Python-3.7.4
  • Perl/5.20.3
  • Perl/5.26.0-foss-2017b
  • Perl/5.26.0-GCCcore-6.4.0
  • Perl/5.28.0-GCCcore-6.4.0
  • Python/2.7.3-goolf-5.2.01
  • Python/2.7.11-intel-2016b
  • Python/2.7.12
  • Python/2.7.14-intel-2018a
  • Python/2.7.14-foss-2017b
  • Python/3.5.2 (D)
  • Python/3.6.1-goolf-5.2.01
  • Python/3.6.3-foss-2017b
  • Python3.6.3-intel-2018a
  • Python/3.7.0-foss-2017b
  • Python/3.7.0-intel-2018a
  • R/3.3.1
  • R/3.4.3
  • R/3.5.2
  • R/3.6.1
  • R/4.0.2-foss-2019b
  • R/4.0.2-foss-2019b-2021.06
  • R-core4.1.0-foss-2019b
  • R-core4.2.2-intel-2019b
  • Rbundle4anvio/2022.11-intel-2019b-R-4.2.2
  • RStudio/1.2.5019-intel-2018a
  • RStudio/1.4.1106-foss-2019b-Java-11-R-4.0.2
  • RStudio/1.4.1717-foss-2019b-Java-11-R-4.1.0-2021.06
  • RStudio-Server/1.4.1717-foss-2019b-Java-11-R-4.1.0-2021.06
  • ScientificPython/2.9.4-Python-2.7.12 (D)
  • SciPy-bundle/2019.10-foss-2019b-Python-2.7.16
  • SciPy-bundle/2019.10-foss-2019b-Python-3.7.4
  • SciPy-bundle/2019.10-fosscuda-2019b-Python-3.7.4
  • SciPy-bundle/2019.10-intel-2019b-Python-3.7.4
  • SciPy-bundle/2020.11-foss-2019b-Python-3.7.4
  • SciPy-bundle/2020.11-fosscuda-2019b-Python-3.7.4
  • SciPy-bundle/2021.05-fosscuda-2022.07-Python-3.7.4
  • SciPy-bundle/2021.05-fosscuda-2022.07-Python-3.7.4
  • TCL/8.6.4-intel-2016b
  • TCL/8.6.5
  • TCL/Tcl/8.6.7-GCCcore-6.4.0
  • TCL/Tcl/8.6.8-GCCcore-6.4.0
  • Tkinter/2.7.14-foss-2017b-Python-2.7.14
  • Tkinter/2.7.14-intel-2018a-Python-2.7.14
  • Tkinter/3.6.3-intel-2018a-Python-3.6.3
  • Tkinter/3.7.4-GCCcore-8.3.0
  • Yasm/1.3.0

/cm/shared/uniol/modules/lib

  • Blosc/1.14.4-GCCcore-6.4.0
  • boto3/1.20.13-GCCcore-8.3.0
  • CFITSIO/3.410
  • CFITSIO/3.42-GCCcore-6.4.0
  • CFITSIO/3.47-GCCcore-8.3.0
  • CUDA-Blas/8.0.44
  • CUDA-FFT/8.0.44
  • double-conversion/3.1.4-GCCcore-6.4.0
  • double-conversion/3.1.4-GCCcore-8.3.0
  • double-conversion/3.1.5-GCCcore-8.3.0
  • FTGL/2.1.3-rc5-GCCcore-8.3.0
  • FLAC/1.3.3-GCCcore-8.3.0
  • FLAC/1.3.4-GCCcore-8.3.0
  • FP16/20-03-2021-GCCcore-8.3.0
  • freeglut/3.0.0-foss-2017b
  • freeglut/3.0.0-GCCcore-6.4.0
  • freeglut/3.2.1-GCCcore-8.3.0
  • freeglut/3.2.1-GCCcore-8.3.0-Mesa-20.0.2
  • giflib/5.2.1-GCCcore-8.3.0
  • GlobalArrays/5.4b-intel-2016b
  • ICU/61.1-GCCcore-6.4.0
  • ICU/64.2-GCCcore-6.4.0
  • jemalloc/5.1.0-GCCcore-6.4.0
  • jemalloc/5.2.1-GCCcore-8.3.0
  • JsonCpp/1.9.3-GCCcore-8.3.0
  • Judy/1.0.5-GCCcore-8.3.0
  • lemon/1.2.1-GCCcore-6.4.0
  • libaio/0.3.111-GCCcore-8.3.0
  • libcpuinfo/27-03-2022-GCCcore-8.3.0
  • libdrm/2.4.70-gimpi-6.2016
  • libdrm/2.4.100-GCCcore-8.3.0
  • libevent/2.1.8-GCCcore-6.4.0
  • libffi/3.2.1-gimpi-6.2016
  • libfabric/1.11.0-GCCcore-8.3.0
  • libgd/2.2.5-GCCcore-8.3.0
  • libglade/2.6.4-intel-2016b
  • libglade/2.6.4-intel-2019b
  • libgloo/05-05-2021-fosscuda-2019b
  • libglvnd/1.2.0-GCCcore-8.3.0
  • libgpuarray/0.7.6-fosscuda-2019b-Python-3.7.4
  • libharu/2.3.0-intel-2016b
  • libhiredis/1.0.2-GCCcore-8.3.0
  • libiconv/1.16-GCCcore-8.3.0
  • libjpeg-turbo/1.5.2-GCCcore-6.4.0
  • libjpeg-turbo/2.0.2-GCCcore-6.4.0
  • libogg/1.3.5-GCCcore-8.3.0
  • libLBFGS/1.10-GCCcore-8.3.0
  • libtool/2.4.6
  • libtool/2.4.6-gimpi-6.2016
  • libpng/1.6.24
  • libpng/1.6.24-gimpi-6.2016
  • libreadline/6.3-gimpi-6.2016
  • libreadline/6.2-goolf-5.2.01
  • libreadline/7.0-GCCcore-6.4.0
  • libreadline/8.0-GCCcore-6.4.0
  • libsamplerate/0.1.9-GCCcore-8.3.0
  • libsamplerate/0.2.2-GCCcore-8.3.0
  • libsndfile/1.0.31-GCCcore-8.3.0
  • LibTIFF/4.0.10-GCCcore-8.3.0
  • libunwind/1.2.1-GCCcore-6.4.0
  • libunwind/1.3.1-GCCcore-8.3.0
  • libusb/1.0.24-GCC-8.3.0
  • libvorbis/1.3.7-GCCcore-8.3.0
  • libxcb/1.8-goolf-5.2.01-Python-2.7.3
  • libXft/2.3.2-intel-2016b
  • libxml2/2.9.4
  • libxml2/2.9.4-gimpi-6.2016
  • libxml2/2.9.9-GCCcore-8.3.0
  • libxml++/2.40.1-GCCcore-8.3.0
  • libXpm/3.5.11-goolf-5.2.01
  • libXpm/3.5.11-intel-2016b
  • libyaml/0.1.7-GCCcore-6.4.0
  • libyaml/0.2.2-GCCcore-6.4.0
  • LMDB/0.9.24-GCCcore-8.3.0
  • lz4/1.9.2-GCCcore-8.3.0
  • FLANN/1.9.1-foss-2019b-Python-3.7.4
  • FLANN/1.9.1-foss-2019b-Python-3.7.4
  • mpi4py/3.0.3-iimpi-2019b-Python-3.7.4-timed-pingpong

mpi4py/3.0.3-iimpi-2019b

  • mysqlclient/1.4.2-foss-2017b-Python-2.7.14
  • NCEPLIBS-bacio/2.5.0-intel-2019b
  • NCEPLIBS-g2/3.4.5-intel-2019b
  • NCEPLIBS-g2c/1.7.0-intel-2019b
  • NCEPLIBS-g2tmpl/1.10.2-intel-2019b
  • NCEPLIBS-sp/2.3.3-intel-2019b
  • NCCL/2.4.8-gcccuda-2019b
  • NCCL/2.11.4-gcccuda-2022.07
  • nettle/3.2-gimpi-6.2016
  • nettle/3.3-GCCcore-6.4.0
  • nettle/3.4.1-GCCcore-6.4.0
  • NIfTI/2.0.0-GCCcore-8.3.0
  • NSPR/4.9-GCCcore-6.4.0
  • NSPR/4.20-GCCcore-6.4.0
  • NSPR/4.23-GCCcore-6.4.0
  • OpenNI/2.2.0-beta2-GCC-8.3.0-Java-11
  • path.py/8.2.1-intel-2016b-Python-3.5.2
  • PMIx/3.1.5-GCCcore-8.3.0
  • pocl/1.4-GCCcore-8.3.0
  • pocl/1.4-gcccuda-2019b
  • PROJ/6.2.1-GCCcore-8.3.0
  • pthreadpool/14-04-2021-GCCcore-8.3.0
  • pybind11/2.4.3-GCCcore-8.3.0-Python-3.7.4
  • pybind11/2.7.1-GCCcore-8.3.0
  • pyYAML//3.12-intel-2018a-Python-3.6.3
  • PyYAML/3.13-foss-2017b-Python-3.6.3
  • PyYAML/5.1-foss-2017b-Python-2.7.14
  • PyYAML/5.4.1-GCCcore-8.3.0
  • PyYAML/6.0-GCCcore-8.3.0
  • RapidJSON/1.1.0-GCCcore-8.3.0
  • RE2/2020-07-01-GCCcore-8.3.0
  • RE2/2022-06-01-GCCcore-8.3.0
  • scikit-build/0.11.1-GCCcore-8.3.0
  • SDL2/2.0.8-GCCcore-6.4.0
  • SDL2/2.0.8-intel-2018a
  • snappy/1.1.7-intel-2018a
  • sndfile-tools//1.5-GCCcore-8.3.0
  • SIONlib/1.6.1
  • tbb/2018_U3-GCCcore-6.4.0
  • tbb/2019.4.199
  • tbb/2020.2-GCCcore-8.3.0
  • typing-extensions/3.7.4.3-GCCcore-8.3.0-Python-3.7.4
  • testpath/0.3-intel-2016b-Python-3.5.2
  • TensorFlow/1.7.0-intel-2018a-Python-3.6.3
  • TensorFlow/1.8.0-intel-2018a-Python-3.6.3
  • TensorFlow/1.13.1-foss-2017b-Python-3.6.3
  • TensorFlow/2.3.1-fosscuda-2019b-Python-3.7.4
  • TensorFlow/2.1.0-fosscuda-2019b-Python-3.7.4
  • TensorFlow/1.13.1-fosscuda-2019b-Python-3.7.4
  • TensorFlow/2.3.1-fosscuda-2019b-Python-3.7.4
  • utf8proc/2.5.0-GCCcore-8.3.0
  • Xerces-C++/3.1.3
  • Xerces-C++/3.2.3-GCCcore-8.3.0
  • xforms/1.2.4
  • xnnpack/23-02-2021-GCCcore-8.3.0
  • xnnpack/23-02-2022-GCCcore-8.3.0
  • zlib/1.2.7-goolf-5.2.01
  • zlib/1.2.8
  • zlib/1.2.8-gimpi-6.2016
  • zlib/1.2.11
  • zlib/1.2.11-GCCcore-6.4.0
  • zoltan/3.83
  • zstd/1.4.4-GCCcore-8.3.0
  • zstd/1.4.5-GCCcore-8.3.0
  • zstd/1.5.0-GCCcore-8.3.0
  • zstd/1.5.2-GCCcore-8.3.0
  • zstd/1.5.4-GCCcore-8.3.0

/cm/shared/uniol/modules/math

  • biomod2/3.4.6-foss-2019b-R-4.0.2
  • dReal/4.21.06.1-Singularity
  • Eigen/3.2.9-gimpi-6.2016
  • Eigen/3.3.7
  • ELPA/2018.11.001-intel-2019b
  • ELPA/2019.11.001-intel-2019b
  • ELPA/2020.11.001-foss-2019b
  • ELSI/2.7.1-intel-2019b-PEXSI
  • bgc/1.03-intel-2018a
  • GEOS/3.8.0-GCC-8.3.0-Python-3.7.4
  • GEOS/3.8.1-GCC-8.3.0-Python-3.7.4
  • GMP/6.1.0-intel-2016b
  • GMP/6.1.1
  • KaHIP/3.14-gimkl-2019b
  • KaHIP/3.14-gompi-2019b
  • Keras /2.1.5-intel-2018a-Python-3.6.3
  • Keras /2.2.4-foss-2017b-Python-3.6.3
  • Keras /2.2.4-fosscuda-2019b-Python-3.7.4
  • Keras /2.4.3-fosscuda-2019b-Python-3.7.4
  • magma/2.5.1-fosscuda-2019b
  • magma/2.5.4-fosscuda-2019b
  • Mesquite /2.3.0-GCCcore-8.3.0
  • Mmg/5.5.2-foss-2019b
  • MPFR/3.1.4
  • MPFR/4.0.2-GCCcore-8.3.0
  • METIS/5.1.0-gimpi-6.2016 (D)
  • MUMPS/5.5.1-intel-2019b-metis
  • NEURON/7.5-intel-2016b
  • NEURON/7.6.2-intel-2018a
  • NTPoly/2.7.0-intel-2019b
  • numexpr/2.6.5-foss-2017b-Python-3.6.3
  • ParMETIS/4.0.3-foss-2019b
  • ParMETIS/4.0.3-iimpi-2019b
  • ParMGridGen/1.0-gompi-2019b
  • quanteda/2.1.0-foss-2019b-R-4.0.2
  • quanteda/2.1.2-foss-2019b-R-4.0.2
  • SCOTCH/6.0.4-gimpi-6.2016
  • SCOTCH/6.0.9-gimkl-2019b
  • SCOTCH/6.0.9-gompi-2019b
  • SCOTCH/6.0.9-iimpi-2019b
  • SCOTCH/7.0.1-gimkl-2019b
  • SCOTCH/7.0.1-gompi-2019b
  • Shapely/1.7.0-GCC-8.3.0-Python-3.7.4
  • statsmodels/0.13.2-foss-2019b
  • Theano/1.0.1-foss-2017b-Python-3.6.3
  • Theano/1.0.4-fosscuda-2019b-Python-3.7.4

/cm/shared/uniol/modules/mpi

  • OpenMPI/1.10.4-GCC-4.9.4
  • OpenMPI/2.0.1-GCC-5.4.0
  • OpenMPI/2.0.1-GCC-6.2.0
  • OpenMPI/2.0.2-GCC-5.4.0-2.26 (D)
  • OpenMPI/3.1.4-gcccuda-2019b
  • OpenMPI/3.1.4-gcccuda-2022.07
  • OpenMPI/4.0.5-iccifort-2019b
  • OpenMPI/4.1.0-GCC-8.3.0
  • OpenMPI/4.1.1-GCC-8.3.0
  • impi/5.1.3.210

/cm/shared/uniol/modules/numlib

  • ATLAS/3.10.2
  • Armadillo/7.500.1
  • Armadillo/10.3.0-gimkl-2019b
  • Armadillo/10.6.2-foss-2019b
  • Armadillo/10.6.2-intel-2019b
  • arpack-ng/3.7.0-foss-2019b
  • arpack-ng/3.7.0-gimkl-2019b
  • beagle-lib/3.1.2-GCC-8.3.0
  • CGAL/4.8.1-gimpi-6.2016
  • CGAL/4.14.1-foss-2019b-Python-3.7.4
  • CLHEP/2.1.3.1
  • CLHEP/2.2.0.4
  • CLHEP/2.3.1.1
  • CLHEP/2.3.4.3
  • CLHEP/2.4.1.0-foss-2017b
  • CLHEP/2.4.0.0-intel-2018a
  • CLHEP/2.4.1.3-foss-2019b
  • CLHEP/2.4.1.3-fosscuda-2019b
  • CLHEP/2.4.5.1-GCC-8.3.0
  • cuDNN/5.1-CUDA-8.0.44
  • cuDNN/7.6.4.38-gcccuda-2019b
  • cuDNN/8.2.2.26-gcccuda-2019b
  • cuDNN/8.2.2.26-gcccuda-2022.07
  • cvx/2.1
  • Eigen/3.2.9
  • FFTW/3.3.5-gompi-5.2.01
  • FFTW-3.3.8-gompic-2019b
  • FFTW/3.3.8-gompi-2019b
  • FFTW/3.3.10-gompic-2022.07
  • FIAT/1.6.0-intel-2016b-Python-2.7.12
  • GMP/6.1.1 (D)
  • GSL/2.1-intel-2016b
  • GSL/2.3-goolf-6.2.01
  • GSL/2.3-intel-2016b
  • GSL/2.4-GCCcore-6.4.0
  • GSL/2.4-goolf-7.2.11
  • GSL/2.6-GCC-8.3.0
  • GSL/2.6-GCCcore-8.3.0
  • Hypre/2.11.1
  • Hypre/2.18.2-intel-2019b
  • imkl/11.3.3.210
  • leda/6.3
  • LinBox/1.4.0
  • Maple/2022
  • MATLAB/2016b
  • MATLAB/2017b
  • MATLAB/2018b
  • MATLAB/2019b
  • MATLAB/2019b
  • MATLAB/2020a
  • MPFR/3.1.4
  • NLopt/2.4.2-foss-2017b
  • NLopt/2.4.2-intel-2018a
  • NLopt/2.6.1-GCCcore-6.4.0
  • NTL/9.8.1
  • Octave/4.0.3
  • OpenBLAS/0.2.19
  • OpenBLAS/0.2.20-GCC-6.4.0-2.28
  • PETSc/3.14.4-intel-2019b
  • PETSc/3.15.5-conda
  • PETSc/3.15.5-intel-2019b-conda
  • PETSc/3.17.4-intel-2019b-downloaded-deps
  • PETSc/3.17.4-intel-2019b
  • Qhull/2015.2
  • Qhull/2020.2-GCCcore-8.3.0
  • ScaLAPACK/2.0.2
  • ScaLAPACK/2.0.2-gompi-2019b
  • ScaLAPACK/2.0.2-gompic-2019b
  • ScaLAPACK/2.1.0-gompic-2022.07
  • SuiteSparse/4.5.3
  • SuiteSparse/4.5.3-intel-2018a-METIS-5.1.0
  • SuiteSparse/5.2.0-intel-2016b-METIS-5.1.0
  • SuiteSparse/5.2.0-intel-2018a-METIS-5.1.0
  • SuiteSparse/5.6.0-foss-2019b
  • SuiteSparse/5.6.0-intel-2019b-METIS-5.1.0
  • stata/13

/cm/shared/uniol/modules/phys

/cm/shared/uniol/modules/6.4/system

  • eudev/3.2.10-GCCcore-8.3.0
  • CUDA-Toolkit/8.0.61
  • CUDA-Toolkit/9.0.176
  • CUDA-Toolkit/9.1.85
  • CUDA/9.0.176
  • CUDA/9.1.85
  • CUDA-10.1.243-GCC-8.3.0
  • CUDA/10.2.89-iccifort-2019b
  • CUDA/10.2.89
  • CUDA/11.4.2
  • file/5.33-GCCcore-6.4.0
  • hwloc/1.11.8-GCCcore-6.4.0
  • OpenSSL/1.0.2t-GCCcore-6.4.0
  • OpenSSL/1.1.0h-GCCcore-6.4.0

/cm/shared/uniol/modules/toolchain

/cm/shared/uniol/modules/tools

  • ansys/18.0
  • awscli/1.27.64-GCCcore-8.3.0-Python-3.7.4
  • bzip2/1.0.6-gimpi-6.2016
  • bokeh/1.4.0-fosscuda-2019b-Python-3.7.4
  • behave/1.2.6-intel-2019b-Python-3.7.4
  • behave/1.2.7.dev2-intel-2019b-Python-3.7.4
  • configurable-http-proxy/1.3.0-intel-2016b-nodejs-4.4.7
  • CONN/20a-MATLAB-2020a
  • DB/18.1.32-GCCcore-8.3.0
  • EasyBuild/3.0.0
  • EasyBuild/3.6.1
  • EasyBuild/3.8.1
  • EasyBuild/3.9.0
  • EasyBuild/3.9.2
  • EasyBuild/3.9.3
  • EasyBuild/4.1.2
  • expat/2.2.0-gimpi-6.2016
  • expat/2.2.7-GCCcore-8.3.0
  • Ghostscript/9.19-intel-2016b
  • Ghostscript/9.27-GCCcore-6.4.0
  • gzip/1.10-GCCcore-8.3.0
  • gpuRIR/03-2022-fosscuda-2019b-Python-3.7.4
  • hypothesis/4.44.2-GCCcore-8.3.0-Python-3.7.4
  • hypothesis/6.14.6-GCCcore-8.3.0
  • ImageJ/1.52q-Java-1.8
  • IOzone/3.490-foss-2019b
  • IPython/6.5.0-foss-2019b-Python-3.7.4
  • IPython/7.13.0-foss-2019b-Python-3.7.4
  • jq/1.6-GCCcore-8.3.0
  • git/2.23.0-GCCcore-8.3.0-nodocs
  • Inspector/2019.1
  • libarchive/3.5.1-GCCcore-8.3.0
  • Meson/0.50.0-intel-2018a-Python-3.7.0
  • Meson/0.51.2-GCCcore-8.3.0-Python-3.7.4
  • Meson/0.55.1-GCCcore-8.3.0-Python-3.7.4
  • Nextflow/20.10.0
  • networkx/2.4-foss-2019b-Python-3.7.4
  • networkx/2.4-fosscuda-2019b-Python-3.7.4
  • networkx/2.6.3-fosscuda-2022.07
  • Ninja/1.9.0-foss-2017b
  • Ninja/1.9.0-GCCcore-8.3.0
  • Ninja/1.10.0-GCCcore-8.3.0
  • Ninja/1.10.2-GCCcore-8.3.0
  • NCO/4.6.0-intel-2016b
  • Oniguruma/6.9.8-GCCcore-8.3.0
  • OSU-Micro-Benchmarks/5.6.2-gompi-2017b
  • parallel/20160622-GCC-5.4.0-2.26
  • parallel/20180422-intel-2018a
  • parallel/20190222-GCCcore-6.4
  • parallel/20210322-GCCcore-8.3.0
  • patchelf/0.9-GCCcore-6.4.0
  • pyroomacoustics/0.6.0-fosscuda-2019b-Python-3.7.4
  • pyHyp/2.6.0-Singularity
  • re2c/1.1.1-GCCcore-6.4.0
  • re2c/1.2.1-GCCcore-8.3.0
  • torchaudio/0.6.0-fosscuda-2019b-Python-3.7.4-PyTorch-1.6.0
  • tree/1.7.0
  • tmux/3.0-rc5-GCCcore-6.4.0
  • Singularity/2.5.2-GCCcore-6.4.0
  • Singularity/2.6.1-GCCcore-6.4.0
  • Spyder/5.0.0a2-foss-2019b-Python-3.7.4
  • SPM/12.5_r7771-MATLAB-2020a
  • UnZip/6.0-GCCcore-8.3.0
  • util-linux/2.29-intel-2016b
  • VTune/2019.1
  • wheel/0.30.0-intel-2018a-Python-3.6.3
  • wheel/0.31.1-foss-2017b-Python-3.6.3
  • XZ/5.2.2-gimpi-6.2016
  • XZ/5.2.2-intel-2016b
  • yaml-cpp/0.6.3-GCCcore-8.3.0

/cm/shared/uniol/modules/vis

  • at-spi2-core/2.34.0-GCCcore-8.3.0
  • at-spi2-atk/2.34.1-GCCcore-8.3.0
  • ATK/2.24.0-intel-2016b
  • ATK/2.24.0-intel-2019b
  • ATK/2.34.1-GCCcore-8.3.0
  • bwidget/1.9.14-GCCcore-8.3.0
  • cairo/1.14.8-GCCcore-6.4.0
  • cairo/1.16.0-GCCcore-6.4.0
  • cairo/1.16.0-GCCcore-8.3.0
  • cairo/1.17.2-GCCcore-8.3.0-snapshot
  • cairomm/1.10.0-GCC-6.4.0-2.28
  • cairomm/1.12.2-GCCcore-8.3.0
  • cairomm/1.15.5-GCCcore-8.3.0
  • FFmpeg/3.1.3-intel-2016b
  • FFmpeg/4.2.1-GCCcore-8.3.0
  • fiji/2.1.2
  • fiji/20220414-conda
  • fontconfig/2.12.1-gimpi-6.2016
  • fontconfig/2.13.1-GCCcore-8.3.0
  • fontconfig/2.13.92-GCCcore-8.3.0
  • freetype/2.7.1
  • freetype/2.6.5-gimpi-6.2016
  • freetype/2.8.1-GCCcore-6.4.0
  • freetype/2.9.1-GCCcore-6.4.0
  • gettext/0.18.2-goolf-5.2.01
  • gettext/0.19.8-gimpi-6.2016
  • Gdk-Pixbuf/2.38.2-GCCcore-8.3.0
  • GL2PS/1.4.0-foss-2017b
  • GL2PS/1.4.0-GCCcore-6.4.0
  • GL2PS/1.4.0-GCCcore-8.3.0
  • GL2PS/1.4.2-GCCcore-8.3.0
  • Glade/3.8.5-intel-2016b-Python-2.7.12
  • GLib/2.49.5
  • GLib/2.52.0-intel-2016b
  • GLib/2.54.2-GCCcore-6.4.0
  • GLib/2.60.1-GCCcore-6.4.0
  • GLib/2.54.3-GCCcore-8.3.0
  • GLib/2.62.0-GCCcore-8.3.0
  • Graphviz/2.49.0-GCCcore-8.3.0-Java-11
  • Graphviz/5.0.0-GCCcore-8.3.0-Python-3.7.4
  • GraphicsMagick/1.3.25-intel-2016b
  • GTK+/2.24.3-intel-2016b
  • GTK+/3.24.13-GCCcore-8.3.0
  • GTK+/3.22.30-fosscuda-2019b
  • GTK+/3.24.23-GCCcore-8.3.0
  • GTS/0.7.6-GCCcore-8.3.0
  • gv/3.7.4
  • ImageMagic/7.0.8-46-GCCcore-6.4.0
  • ImageMagic/7.0.9-5-GCCcore-8.3.0
  • inputproto/2.3-goolf-5.2.01
  • JasPer/2.0.14-GCCcore-8.3.0
  • JasPer/2.0.33-GCCcore-8.3.0
  • kbproto/1.0.6-goolf-5.2.01
  • libGLU/9.0.1-GCCcore-8.3.0
  • libGLU/9.0.1-GCCcore-8.3.0-Mesa-20.0.2
  • matplotlib/2.1.2-intel-2018a-Python-2.7.14
  • matplotlib/2.1.2-intel-2018a-Python-3.6.3
  • matplotlib/2.2.4-foss-2017b-Python-2.7.14
  • matplotlib/3.0.3-intel-2018a-Python-3.6.3
  • matplotlib/3.0.3-foss-2017b-Python-3.6.3
  • matplotlib/3.1.1-foss-2019b-Python-3.7.4
  • matplotlib/3.3.3-fosscuda-2019b-Python-3.7.4
  • Mesa/17.2.5-foss-2017b
  • Mesa/17.2.5-GCCcore-6.4.0
  • Mesa/17.3.6-intel-2018a
  • Mesa/18.1.1-GCCcore-6.4.0
  • Mesa/19.0.1-GCCcore-6.4.0
  • Mesa/19.1.4-GCCcore-6.4.0
  • Mesa/20.0.2-GCCcore-8.3.0
  • NiBabel/2.2.1-intel-2018a-Python-3.6.3
  • NiBabel/3.2.0-foss-2019b-Python-3.7.4
  • Nilearn/0.7.1-foss-2019b-Python-3.7.4
  • OpenCV/3.1.0-intel-2016b
  • OpenCV/3.3.0-foss-2017b-Python-3.6.3
  • OpenCV/4.2.0-fosscuda-2019b-Python-3.7.4
  • OpenCV/4.4.0-fosscuda-2019b-Python-3.7.4
  • p4vasp/0.3.29-intel-2016b-Python-2.7.12
  • p4vasp/0.3.30-Singularity
  • ParaView/5.1.2-goolf-5.2.01-mpi
  • ParaView/5.1.2-intel-2016b-mpi
  • ParaView/5.6.2-foss-2019b-Python-3.7.4-mpi
  • ParaView/5.6.2-intel-2019b-Python-3.7.4-mpi
  • PCL/1.12.0-fosscuda-2019b-Python-3.7.4
  • PyQt5/5.15.1-GCCcore-8.3.0
  • scikit-image/0.17.1-fosscuda-2019b-Python-3.7.4
  • scikit-image/0.13.0-intel-2016b-Python-2.7.12
  • scikit-image/0.14.0-intel-2018a-Python-2.7.14
  • scikit-image/0.14.0-intel-2018a-Python-3.6.3
  • Tk/8.6.4-intel-2016b-no-X11
  • Tk/8.6.5-gimpi-6.2016
  • Tk/8.6.8-GCCcore-6.4.0
  • torchvision/0.5.0-fosscuda-2019b-Python-3.7.4-PyTorch-1.4.0
  • torchvision/0.7.0-fosscuda-2019b-Python-3.7.4-PyTorch-1.6.0
  • torchvision/0.8.2-fosscuda-2019b-Python-3.7.4-PyTorch-1.7.0
  • UDUNITS/2.2.20-intel-2016b
  • gettext/0.19.8
  • gnuplot/5.0.5-intel-2016b
  • gnuplot/5.2.2-foss-2017b
  • gnuplot/5.2.6-foss-2017b
  • grace/5.1.25
  • libICE/1.0.8-goolf-5.2.01
  • libSM/1.2.1-goolf-5.2.01
  • libX11/1.6.1-goolf-5.2.01
  • libX11/1.6.3-intel-2016b
  • libXaw/1.0.12-goolf-5.2.01
  • libXpm/3.5.11-goolf-5.2.01
  • libXt/1.1.4-goolf-5.2.01
  • LittleCMS/2.9-GCCcore-6.4.0
  • motif/2.3.6
  • ncview/2.1.7-intel-2016b
  • pixman/0.38.4-GCCcore-8.3.0
  • Pillow-SIMD/6.0.x.post0-GCCcore-8.3.0
  • PyCairo/1.10.0-intel-2016b-Python-2.7.12
  • PyCairo/1.18.2-GCCcore-8.3.0
  • PyCairo/1.19.1-GCCcore-8.3.0-Python-3.7.4
  • PyGObject/2.28.6-intel-2016b-Python-2.7.12
  • PyGObject/2.28.7-intel-2019b-Python-2.7.16
  • PyGObject/3.34.0-GCCcore-8.3.0-Python-2.7.16
  • PyGTK/2.24.0-intel-2016b-Python-2.7.12
  • PyOpenGL/3.1.1a1-intel-2016b
  • Togl/2.0-GCCcore-8.3.0
  • VTK/8.1.0-intel-2018a-Python-2.7.14
  • VTK/8.1.1-foss-2017b-Python-2.7.14
  • VTK/8.2.0-foss-2019b-Python-3.7.4
  • VTK/8.2.0-intel-2019b-Python-3.7.4
  • VTK/9.0.1-fosscuda-2019b-Python-3.7.4
  • VTK/9.0.1-fosscuda-2019b_master (more recent than 9.0.1 & bug-fixed)
  • VTK/9.0.1-fosscuda-2019b-Qt5
  • VTK/9.0.3-fosscuda-2019b-Qt5
  • X11/20160819-goolf-5.2.01
  • X11/20171023-GCCcore-6.4.0
  • X11/20180604-GCCcore-6.4.0
  • X11/20190311-GCCcore-6.4.0
  • X11/20200222-GCCcore-8.3.0
  • X11/20210518-GCCcore-8.3.0
  • X11/all
  • XCrySDen/1.6.2-intel-2019b

The list above is based on the information gathered by the command

module avail

If you want to create a list of every available software on the cluster, on your own, you can do this by simply using the command:

module spider

The available software will be listed in the format: name, version