Difference between revisions of "HPC User Wiki 2016"
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* [[Login | Login to the HPC cluster]] | * [[Login | Login to the HPC cluster]] | ||
** [[Login#HPC_Account | Getting an HPC account]] | |||
** [[Login#Connect to CARL/EDDY using the Remote Desktop Protocol | Remote Desktop Connection]] | ** [[Login#Connect to CARL/EDDY using the Remote Desktop Protocol | Remote Desktop Connection]] | ||
** [[Login#Using SSH Keys for login | Using SSH Keys]] | ** [[Login#Using SSH Keys for login | Using SSH Keys]] | ||
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*[[Kraken 2016 | Kraken]] | *[[Kraken 2016 | Kraken]] | ||
*[[Kaldi 2016 | Kaldi]] | *[[Kaldi 2016 | Kaldi]] | ||
*[[Kaiju 2016 | Kaiju]] | |||
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*[[Lighter]] | *[[Lighter]] | ||
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*[[NextGenMap]] | *[[NextGenMap]] | ||
*[[NiBabel 2016 | NiBabel]] | *[[NiBabel 2016 | NiBabel]] | ||
*[[nQuire 2016 | nQuire]] | |||
*[[OrthoFinder 2016 | OrthoFinder]] | *[[OrthoFinder 2016 | OrthoFinder]] | ||
*[[OMA 2016 | OMA]] | *[[OMA 2016 | OMA]] | ||
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* [[Perl 2016 | Perl]] | * [[Perl 2016 | Perl]] | ||
* [[Python 2016 | Python]] | * [[Python 2016 | Python]] | ||
** [[JupyterLab]] | |||
* ScientificPython | * ScientificPython | ||
** [[Anaconda 2016 | Anaconda3 / Miniconda3]] | ** [[Anaconda 2016 | Anaconda3 / Miniconda3]] | ||
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* [[OpenACC Workshop]]<br>(28./29.3.2017, 10am-6pm, W01 0-008) | * [[OpenACC Workshop]]<br>(28./29.3.2017, 10am-6pm, W01 0-008) | ||
* [[Workshop Nvidia HPC SDK]]<br>(06.07.2021, 10am-1pm, online) | * [[Workshop Nvidia HPC SDK]]<br>(06.07.2021, 10am-1pm, online) | ||
* [[Workshop How to AMD]]<br>(04./05.04.2023, 14pm-17pm, online) | |||
* [[HPC Introduction | Introduction to HPC (three day course)]] | * [[HPC Introduction | Introduction to HPC (three day course)]] | ||
** [[HPC Introduction 03/ | ** [[HPC Introduction 03/2023 | upcoming or most recent course]]<br>(27.03-29.03.2023) | ||
** [[HPC Introduction | all course]] | ** [[HPC Introduction | all course]] | ||
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---------------- [[Migration|Migration to the new HPC clusters]] ---------------- | |||
The old wiki for HERO and FLOW is found [[Welcome to the HPC User Wiki of the University of Oldenburg | here]].<br><br> | The old wiki for HERO and FLOW is found [[Welcome to the HPC User Wiki of the University of Oldenburg | here]].<br><br> | ||
<span style="color: green">[[HPC Support Internal]]</span> <br> | <span style="color: green">[[HPC Support Internal]]</span> <br> | ||
[[Intel CPU Bug]]<br> | [[Intel CPU Bug]]<br> | ||
[[Globus Data Transfer]] | [[Globus Data Transfer]] | ||
Latest revision as of 10:54, 18 April 2023
Documentation for High-Performance Computing at the University Oldenburg
This is the HPC User Wiki for the HPC clusters CARL and EDDY. If you would like to contribute please contact Scientific Computing!
General Information
---------------- FAQ - Frequently Asked Questions ----------------
------------- Want to stay in contact with the HPC support and other users? Join our Mattermost group! -------------
------------------ Tired of reading long wiki articles? ------------------ ------------- Check out our new HPC Video Lectures! -------------
| HPC Facilities | Quickstart Guide | User environment | Job Management (Queueing) System |
|---|---|---|---|
|
|
Application Software and Libraries
---------------------- What's installed and what's new? ----------------------
| Compiler and Development Tools | Quantum Chemistry | Biology & Medicine | Mathematics, Statistics & Scripting | |
|---|---|---|---|---|
|
|
|||
| Libraries | Physics | Machine Learning | Computational Fluid Dynamics | Visualisation |
|---|---|---|---|---|
Courses and Tutorials
Below you can find a list of Courses and Tutorials for our HPC clusters. Currently, a short, two-hour introduction for the new clusters CARL and EDDY is planned. During the summer semester a lecture "Introduction to HPC" is held (2h/week). If you are interested in attending or would like to request a course please contact Scientific Computing.
| Courses and Workshops | Lectures | Tutorials |
|---|---|---|
|
Contact
In case you need HPC support you can use the contacts listed below. The servicedesk of IT services can be contacted for all questions regarding HPC, and are recommended in particular when someone is absent (e.g. due to a vacation).
| HPC Resource | Name | |
|---|---|---|
| CARL and EDDY | General HPC Support and Servicedesk |
hpcsupport@uni-oldenburg.de servicedesk@uni-oldenburg.de |
| CARL | Stefan Harfst Fynn Schwietzer |
stefan.harfst@uni-oldenburg.de fynn.schwietzer1@uni-oldenburg.de |
| EDDY | Wilke Trei | wilke.trei@forwind.de |
---------------- Migration to the new HPC clusters ----------------
The old wiki for HERO and FLOW is found here.
HPC Support Internal
Intel CPU Bug
Globus Data Transfer
